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Toeprinting Analysis of Translation Initiation Complex Formation on Mammalian mRNAs
Published on: May 10, 2018
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Co-translational assembly of mammalian nuclear multisubunit complexes
Ivanka Kamenova1,2,3,4, Pooja Mukherjee1,2,3,4, Sascha Conic1,2,3,4
1Institut de Génétique et de Biologie Moléculaire et Cellulaire, 67404, Illkirch, France.
Nature Communications
|April 17, 2019
Summary
Mammalian cells assemble large protein complexes co-translationally, linking protein synthesis and assembly. Dimerization domains dictate assembly pathways, preventing protein degradation and aggregation.
Area of Science:
- Molecular Biology
- Cell Biology
- Structural Biology
Background:
- Cells expend considerable energy constructing multiprotein assemblies with precise subunit ratios.
- The genomic dispersion of genes for subunits in eukaryotic multisubunit complexes raises questions about their assembly mechanisms.
Purpose of the Study:
- To investigate the assembly process of large mammalian nuclear transcription complexes.
- To determine the role of dimerization domains in directing co-translational assembly pathways.
- To elucidate the link between protein synthesis and complex assembly in mammalian cells.
Main Methods:
- Co-translational assembly assays for mammalian nuclear transcription complexes (TFIID, TREX-2, SAGA).
- Analysis of dimerization domains and their influence on assembly kinetics (simultaneous vs. sequential).
- Assessment of protein degradation resulting from failed co-translational interactions.
Main Results:
- Mammalian nuclear transcription complexes assemble co-translationally.
- Dimerization domain position and type dictate simultaneous or sequential assembly.
- Failure in co-translational interaction leads to partner protein degradation.
Conclusions:
- Protein synthesis and complex assembly are intrinsically linked in mammalian cells.
- Co-translational assembly is a key mechanism to prevent non-specific interactions and protein aggregation.
- Findings provide insights into endogenous co-translational building blocks for structural biology.
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