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Published on: May 27, 2020
Evolutionary conservation of MLO gene promoter signatures
Giuseppe Andolfo1, Paolo Iovieno1, Luigi Ricciardi2
1Department of Agricultural Sciences, University of Naples "Federico II", Via Università 100, 80055, Portici (Naples), Italy.
Background:
Powdery mildew (PM) is a widespread fungal disease of plants in temperate climates, causing significant economic losses in agricultural settings. Specific homologs of the MLO gene family are PM susceptibility factors, as their loss-of function results in durable PM resistance (mlo resistance) in several plant species. The role of MLO susceptibility genes in plant-pathogen interactions is still elusive, however it is known that they are strongly upregulated following PM infection.
Results:
In this study, we investigated the structure of 414 Putative Promoter Regions (PPRs) of MLO genes and highlighted motif and regulatory element patterns related to genomic relationships among species and phylogenetic distance among homologs. A TC box-like motif and a thymine-rich motif were found to be overrepresented in MLO genes transcriptionally upregulated upon infection with PM fungi. As proof of concept, we showed that the expression of a melon (Cucumis melo L.) gene enriched for the motifs above mentioned was strongly upregulated upon infection with the PM fungus Podosphaera xanthii.
Conclusion:
While identifying a candidate MLO susceptibility gene in melon, this study provides insight on the transcriptional control of MLO genes and indicates diagnostic features useful to identify MLO susceptibility genes across species affected by the PM disease.
Insights
Researchers identified key DNA motifs in MLO genes that increase susceptibility to powdery mildew (PM). These findings help identify MLO susceptibility genes in plants, aiding in developing disease resistance strategies.
Area of Science:
- Plant pathology
- Molecular biology
- Genomics
Background:
- Powdery mildew (PM) is a significant fungal disease causing economic losses in agriculture.
- MLO gene family members act as susceptibility factors for PM, with loss-of-function conferring resistance.
- MLO susceptibility genes are upregulated upon PM infection, but their precise role remains unclear.
Purpose of the Study:
- To investigate the regulatory elements and motifs within MLO gene promoter regions.
- To understand the genomic relationships and phylogenetic patterns of MLO homologs.
- To identify diagnostic features for MLO susceptibility genes in plants.
Main Methods:
- Analysis of 414 Putative Promoter Regions (PPRs) of MLO genes.
- Identification of overrepresented motifs in MLO genes upregulated by PM infection.
- Expression analysis of a candidate melon MLO gene upon Podosphaera xanthii infection.
Main Results:
- Specific motifs, including a TC box-like and a thymine-rich motif, were overrepresented in MLO genes upregulated by PM.
- These motifs are associated with genomic relationships and phylogenetic distances among MLO homologs.
- A melon MLO gene containing these motifs showed strong upregulation after PM infection.
Conclusions:
- Identified a candidate MLO susceptibility gene in melon (Cucumis melo L.).
- Provided insights into the transcriptional control mechanisms of MLO genes.
- Indicated diagnostic features for identifying MLO susceptibility genes across plant species affected by PM.
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