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Updated: Jan 25, 2026

Direct Restart of a Replication Fork Stalled by a Head-On RNA Polymerase
Published on: April 29, 2010
Ca2+-Stimulated AMPK-Dependent Phosphorylation of Exo1 Protects Stressed Replication Forks from Aberrant Resection
Shan Li1, Zeno Lavagnino1, Delphine Lemacon2
1Department of Cell Biology and Physiology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Abstract:
Abnormal processing of stressed replication forks by nucleases can cause fork collapse, genomic instability, and cell death. Despite its importance, it is poorly understood how the cell properly controls nucleases to prevent detrimental fork processing. Here, we report a signaling pathway that controls the activity of exonuclease Exo1 to prevent aberrant fork resection during replication stress. Our results indicate that replication stress elevates intracellular Ca2+ concentration ([Ca2+]i), leading to activation of CaMKK2 and the downstream kinase 5' AMP-activated protein kinase (AMPK). Following activation, AMPK directly phosphorylates Exo1 at serine 746 to promote 14-3-3 binding and inhibit Exo1 recruitment to stressed replication forks, thereby avoiding unscheduled fork resection. Disruption of this signaling pathway results in excessive ssDNA, chromosomal instability, and hypersensitivity to replication stress inducers. These findings reveal a link between [Ca2+]i and the replication stress response as well as a function of the Ca2+-CaMKK2-AMPK signaling axis in safeguarding fork structure to maintain genome stability.
Insights
A newly discovered pathway uses calcium signaling to control the exonuclease Exo1, preventing DNA replication fork collapse and maintaining genome stability during replication stress.
Area of Science:
- Molecular Biology
- Cell Biology
- Genetics
Background:
- Replication fork instability due to nucleases causes genomic instability and cell death.
- Cellular mechanisms controlling nucleases during replication stress are not fully understood.
Purpose of the Study:
- To elucidate the signaling pathway regulating exonuclease activity during replication stress.
- To identify how cells prevent aberrant processing of stressed replication forks.
Main Methods:
- Investigated the role of intracellular calcium ([Ca2+]i), CaMKK2, and AMPK in regulating Exo1.
- Utilized biochemical assays and cellular studies to examine Exo1 phosphorylation and recruitment to replication forks.
Main Results:
- Replication stress increases [Ca2+]i, activating CaMKK2 and AMPK.
- AMPK phosphorylates Exo1 at serine 746, promoting 14-3-3 binding and inhibiting its recruitment to stressed forks.
- Disrupting this pathway leads to excessive single-stranded DNA (ssDNA), chromosomal instability, and sensitivity to replication stress.
Conclusions:
- A novel Ca2+-CaMKK2-AMPK signaling pathway safeguards replication fork structure.
- This pathway inhibits Exo1 activity to prevent genomic instability during replication stress.
- This finding links calcium signaling to the replication stress response and genome maintenance.
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