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Updated: Jan 25, 2026

Genome-wide Purification of Extrachromosomal Circular DNA from Eukaryotic Cells
Published on: April 4, 2016
G-OnRamp: a Galaxy-based platform for collaborative annotation of eukaryotic genomes
Yating Liu1, Luke Sargent2, Wilson Leung1
1Department of Biology, Washington University in St. Louis, St. Louis, MO, USA.
Summary:
G-OnRamp provides a user-friendly, web-based platform for collaborative, end-to-end annotation of eukaryotic genomes using UCSC Assembly Hubs and JBrowse/Apollo genome browsers with evidence tracks derived from sequence alignments, ab initio gene predictors, RNA-Seq data and repeat finders. G-OnRamp can be used to visualize large genomics datasets and to perform collaborative genome annotation projects in both research and educational settings.
Availability And Implementation:
The virtual machine images and tutorials are available on the G-OnRamp web site (http://g-onramp.org/deployments). The source code is available under an Academic Free License version 3.0 through the goeckslab GitHub repository (https://github.com/goeckslab).
Supplementary Information:
Supplementary data are available at Bioinformatics online.
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