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Updated: Jan 25, 2026

Testing Targeted Therapies in Cancer using Structural DNA Alteration Analysis and Patient-Derived Xenografts
Published on: July 25, 2020
Gliosarcoma: distinct molecular pathways and genomic alterations identified by DNA copy number/SNP microarray
Lindsey Lowder1, Jennifer Hauenstein2, Ashley Woods3
1Department of Pathology & Laboratory Medicine, Emory University Hospital, H185D, 1364 Clifton Road, NE, Atlanta, GA, 30322, USA. lolowde@emory.edu.
Gliosarcoma, a glioblastoma variant, shows frequent DNA copy number losses, particularly on chromosomes 9 and 10. These alterations, along with specific molecular pathways, may drive gliosarcoma development and offer therapeutic targets.
Area of Science:
- Neuro-oncology
- Genomics
- Molecular Biology
Background:
- Gliosarcoma is a rare and aggressive histologic variant of glioblastoma (GBM).
- It carries a poor prognosis with median survival under one year.
- Standard treatments include surgery, radiation, and chemotherapy, but no cure exists.
Purpose of the Study:
- To comprehensively analyze DNA copy number (CN) alterations in gliosarcoma.
- To identify molecular pathways associated with these CN changes.
- To explore potential therapeutic targets for gliosarcoma.
Main Methods:
- Cytogenomic DNA copy number (CN) microarray (OncoScan®) was performed on 18 gliosarcoma cases.
- MetaCore™ enrichment analysis was used to identify associated molecular pathways.
Main Results:
- Copy number loss was the most frequent alteration (57%), significantly exceeding amplifications and loss of heterozygosity.
- Chromosomes 9 and 10 showed the highest number of losses, often involving CDKN2A/B.
- Copy number gains (26.2%) were most common on chromosome 7, with pathways like HOXA, Rho GTPases, and EGFR implicated.
Conclusions:
- Detected copy number alterations and pathways may be key drivers of gliosarcoma oncogenesis.
- Findings provide a foundation for targeted molecular analysis and potential therapeutic strategies.
- Further research into these genomic alterations could lead to novel treatments for gliosarcoma.
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