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Updated: Jan 25, 2026

Quantifying Intermembrane Distances with Serial Image Dilations
Published on: September 28, 2018
Interpreting distance-decay pattern of soil bacteria via quantifying the assembly processes at multiple spatial
Maomao Feng1,2, Binu M Tripathi3, Yu Shi1
1State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, China.
Soil bacterial communities show a distance-decay pattern, with closer sites having similar microbes. This pattern is driven by dispersal at small scales and selection at larger scales.
Area of Science:
- Microbial Ecology
- Soil Science
- Biogeography
Background:
- The distance-decay pattern, where microbial similarity decreases with spatial separation, is well-established in soil microbiomes.
- However, the specific ecological processes driving this pattern remain incompletely understood.
Purpose of the Study:
- To investigate the bacterial community assembly processes across spatial scales in Northeast China maize fields.
- To quantify the contributions of dispersal, selection, and environmental factors to the soil microbiome's distance-decay pattern.
Main Methods:
- Utilized Illumina MiSeq sequencing to analyze bacterial community composition.
- Examined spatial turnover of microbial communities at multiple spatial scales.
- Quantified the influence of geographic, biotic, and abiotic factors on community structure.
Main Results:
- Bacterial community assembly processes shifted with spatial scale: homogenizing dispersal dominated small scales, while variable selection dominated large scales.
- Dispersal (homogenizing and limitation) explained 33% of spatial turnover.
- Deterministic selection processes were most influential (57%), with abiotic factors (soil pH) and biotic factors contributing significantly to variation.
Conclusions:
- The study provides a quantitative framework for understanding the soil microbiome's distance-decay pattern by analyzing assembly processes across spatial scales.
- Demonstrates the interplay of dispersal and selection in shaping soil bacterial communities.
- Offers insights into the roles of abiotic, biotic, and geographic factors in microbial biogeography.
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