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Updated: Jan 24, 2026

Author Spotlight: Combining Proximity Ligand Assay with Gamma-H2AX Staining to Characterize Protein Interactions in DNA Damage Response
Published on: August 2, 2024
NEK5 interacts with topoisomerase IIβ and is involved in the DNA damage response induced by etoposide
Talita Diniz Melo-Hanchuk1, Priscila Ferreira Slepicka2, Alessandra Luiza Pelegrini3
1Departamento de Bioquímica e Biologia Tecidual, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, São Paulo, Brazil.
Abstract:
Cells are daily submitted to high levels of DNA lesions that trigger complex pathways and cellular responses by cell cycle arrest, apoptosis, alterations in transcriptional response, and the onset of DNA repair. Members of the NIMA-related kinase (NEK) family have been related to DNA damage response and repair and the first insight about NEK5 in this context is related to its role in centrosome separation resulting in defects in chromosome integrity. Here we investigate the potential correlation between NEK5 and the DNA damage repair index. The effect of NEK5 in double-strand breaks caused by etoposide was accessed by alkaline comet assay and revealed that NEK5-silenced cells are more sensitive to etoposide treatment. Topoisomerase IIβ (TOPIIβ) is a target of etoposide that leads to the production of DNA breaks. We demonstrate that NEK5 interacts with TOPIIβ, and the dynamics of this interaction is evaluated by proximity ligation assay. The complex NEK5/TOPIIβ is formed immediately after etoposide treatment. Taken together, the results of our study reveal that NEK5 depletion increases DNA damage and impairs proper DNA damage response, pointing out NEK5 as a potential kinase contributor to genomic stability.
Insights
NIMA-related kinase 5 (NEK5) plays a crucial role in DNA repair. Silencing NEK5 increases DNA damage sensitivity and impairs cellular responses, highlighting NEK5
Area of Science:
- Molecular Biology
- Cellular Biology
- Genetics
Background:
- Cells constantly face DNA damage, initiating complex repair pathways.
- NIMA-related kinases (NEKs) are implicated in DNA damage response (DDR).
- NEK5's role in centrosome separation suggests a link to genomic integrity.
Purpose of the Study:
- To investigate the correlation between NEK5 and DNA damage repair.
- To elucidate NEK5's function in response to DNA double-strand breaks.
Main Methods:
- Etoposide treatment to induce DNA double-strand breaks.
- Alkaline comet assay to assess DNA damage.
- Proximity ligation assay to evaluate NEK5/Topoisomerase IIβ interaction.
Main Results:
- NEK5-silenced cells exhibited increased sensitivity to etoposide.
- NEK5 was found to interact with Topoisomerase IIβ (TOPIIβ) upon etoposide treatment.
- NEK5 depletion led to elevated DNA damage and impaired DNA damage response.
Conclusions:
- NEK5 depletion exacerbates DNA damage and compromises DNA repair.
- NEK5 interacts with TOPIIβ, a key enzyme in etoposide-induced DNA breaks.
- NEK5 is a potential kinase involved in maintaining genomic stability.
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