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Related Concept Videos

What is Variation?01:14

What is Variation?

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Apart from the measures of central tendency, distribution, outliers, and the changing characteristics of data with time, an important characteristic of any data set is its variation or spread. In some data sets, the data values are concentrated closely near the mean; in others, the data values are more widely spread out from the mean.
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Variation01:19

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An important characteristic of any set of data is the variation in the data. In some data sets, the data values are concentrated closely near the mean; in other data sets, the data values are more widely spread out from the mean. The most common measure of variation, or spread, is the standard deviation, which is the square root of variance.
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Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
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Change in atmospheric pressure with height is particularly interesting. The decrease in atmospheric pressure with increasing altitude is due to the decreasing gravitational force per unit area as we move away from the surface of the earth.
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Sequencing of the human genome has opened up several best-kept secrets of the genome. Scientists have identified thousands of genome variations that exist within a population. These variations can be a single nucleotide or a larger chromosomal variation.
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The coefficient of variation measures the dispersion of the data points or distribution around the mean. Using the coefficient of variation, we can compare two data series with drastically different means or different units of measurement. The coefficient of variation for a sample and a population is expressed as a percentage of the ratio of standard deviation to the mean.
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Applications of EEG Neuroimaging Data: Event-related Potentials, Spectral Power, and Multiscale Entropy
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Spectral Spatial Variation.

Martin Hohmann1,2, Heinz Albrecht3, Jonas Mudter4

  • 1Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Institute of Photonic Technologies (LPT), Konrad-Zuse-Straße 3/5, 91052, Erlangen, Germany. Martin.Hohmann@FAU.de.

Scientific Reports
|May 19, 2019
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Summary
This summary is machine-generated.

This study introduces spectral-spatial-variation (SSV) as a powerful feature for automatic carcinoma detection using hyperspectral images. SSV significantly improves classification accuracy in stomach cancer detection, reducing computational demands.

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Area of Science:

  • Medical Imaging
  • Computational Pathology
  • Biomedical Engineering

Background:

  • Automatic carcinoma detection from hyperspectral images is crucial as direct clinical visualization is not possible.
  • Standard methods require extensive features, leading to high computational costs and slow analysis on standard hardware.
  • The need for efficient and accurate feature extraction is paramount for practical clinical application.

Purpose of the Study:

  • To introduce and evaluate the spectral-spatial-variation (SSV) as a novel, strong feature for carcinoma detection.
  • To demonstrate the efficacy of SSV in improving classification accuracy for stomach cancer detection using multispectral imaging.
  • To address the computational limitations of traditional feature-heavy approaches.

Main Methods:

  • Developed a novel feature, spectral-spatial-variation (SSV), defined as the residual of a 3D hyperspectral data cube minus its local approximation.
  • Applied SSV for pixel-wise analysis in multispectral images of stomach tissue.
  • Compared classification performance with and without the SSV feature, assessing metrics like Area Under the Curve (AUC).

Main Results:

  • The incorporation of SSV significantly enhances the classification results for stomach carcinoma detection.
  • SSV acts as a strong feature, simplifying the analysis process.
  • In certain scenarios, SSV-based classification achieved AUC comparable to using 72 traditional spatial features.

Conclusions:

  • Spectral-spatial-variation (SSV) is an effective feature for improving automatic carcinoma detection in multispectral imaging.
  • SSV offers a computationally efficient alternative to high-dimensional feature sets, making analysis feasible on standard PCs.
  • This approach holds significant promise for advancing the clinical utility of hyperspectral imaging in cancer diagnosis.