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Updated: Jan 24, 2026

Quantifying the Activity of cis-Regulatory Elements in the Mouse Retina by Explant Electroporation
Published on: June 28, 2011
Shaping the human brain: evolutionary cis-regulatory plasticity drives changes in synaptic activity-controlled
Priit Pruunsild1, Hilmar Bading1
1Department of Neurobiology, Interdisciplinary Center for Neurosciences (IZN), Heidelberg University, 69120 Heidelberg, Germany.
Neuronal gene expression programs are similar in mice and humans but have distinct features. Cis-regulatory plasticity in enhancers likely drives these species-specific differences in activity-regulated transcription.
Area of Science:
- Neuroscience
- Genetics
- Evolutionary Biology
Background:
- Neuronal activity regulates gene expression crucial for synaptic function and plasticity.
- While core pathways are conserved, species-specific differences exist in gene activity responses.
Purpose of the Study:
- To explore the origins of dissimilarities in activity-regulated transcription between species.
- To investigate the role of cis-regulatory evolution in shaping neuronal gene expression diversity.
Main Methods:
- Comparative analysis of neuronal activity-induced gene expression.
- Focus on synapse-to-nucleus signaling pathways.
- Examination of cis-regulatory elements and transcription factor binding sites.
Main Results:
- Synapse-to-nucleus signaling pathways are evolutionarily conserved.
- Cis-regulatory plasticity has remodeled the enhancer landscape, leading to species-specific gene regulation.
- Evolutionary changes in transcription factor binding sites contribute to diversity.
Conclusions:
- Species-specific differences in activity-regulated transcription arise from cis-regulatory evolution.
- The enhancer landscape's remodeling by cis-regulatory plasticity drives these variations.
- This plasticity may confer unique qualities to human neuronal gene programs.
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