Related Experiment Video
Updated: Jan 24, 2026

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry
Published on: April 8, 2020
Ion reactions in atmospherically-relevant clusters: mechanisms, dynamics and spectroscopic signatures
Natalia V Karimova1, Laura M McCaslin2, R Benny Gerber3
1Department of Chemistry, University of California, Irvine, CA 92697, USA. benny@fh.huji.ac.il.
Abstract:
Reactions of nitrogen oxides with seawater are of major atmospheric importance, but microscopic understanding of these processes is still largely unavailable. In this paper we explore models of reactions of N2O4 with ions in water in order to provide molecular-level understanding of the processes. Presented here are studies of N2O4 interacting with two ions, SO42- and Cl-, in small water clusters. Reactions of the asymmetric conformer of N2O4 with SO42- ions in water clusters are studied via ab initio molecular dynamics (AIMD) simulations in order to unravel the microscopic mechanism of the processes and predict the timescales of different steps. Spectroscopic signatures of the reaction are proposed. The mechanisms of chloride substitution and hydrolysis of symmetric and asymmetric N2O4 are explored via intrinsic reaction coordinate (IRC) calculations. Spectroscopic calculations for relevant species suggest possible experimental signatures for the processes. The results of these model ion-N2O4 reactions in water throw light on the molecular-level mechanisms of the reactions of nitrogen oxides with seawater.
Related Concept Videos
Reaction Mechanisms
For instance, the decomposition of ozone appears to follow a mechanism with two steps:
SN2 Reaction: Mechanism
The presence of the more electronegative halogen in the substrate creates a polarized carbon-halide bond. The halide pulls the electron cloud generating an electrophilic center at the carbon atom. Thus, the carbon atom carries a partial positive charge while the halide has a...
SN1 Reaction: Mechanism
Firstly, the haloalkane ionizes to generate a carbocation intermediate and a halide ion. This heterolytic cleavage is highly endothermic with large activation energy. The ionization of the substrate, facilitated by a...
Mechanically-gated Ion Channels
Precipitation of Ions
The equation that describes the equilibrium between solid calcium carbonate and its solvated ions is:
E2 Reaction: Kinetics and Mechanism

