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Updated: Jan 24, 2026

A Rapid Screening Workflow to Identify Potential Combination Therapy for GBM using Patient-Derived Glioma Stem Cells
Published on: March 28, 2021
The antibiotic clofoctol suppresses glioma stem cell proliferation by activating KLF13
Yan Hu1, Meilian Zhang1, Ningyu Tian1
1State Key Laboratory of Medical Molecular Biology, Department of Molecular Biology and Biochemistry, Institute of Basic Medical Sciences, Medical Primate Research Center, Neuroscience Center, Chinese Academy of Medical Sciences, School of Basic Medicine, Peking Union Medical College, Beijing, China.
Abstract:
Gliomas account for approximately 80% of primary malignant tumors in the central nervous system. Despite aggressive therapy, the prognosis of patients remains extremely poor. Glioma stem cells (GSCs) which considered as the potential target of therapy for their crucial role in therapeutic resistance and tumor recurrence, are believed to be key factors for the disappointing outcome. Here, we took advantage of GSCs as the cell model to perform high-throughput drug screening and the old antibiotic, clofoctol, was identified as the most effective compound, showing reduction of colony-formation and induction of apoptosis of GSCs. Moreover, growth of tumors was inhibited obviously in vivo after clofoctol treatment especially in primary patient-derived xenografts (PDXs) and transgenic xenografts. The anticancer mechanisms demonstrated by analyzing related downstream genes and discovering the targeted binding protein revealed that clofoctol exhibited the inhibition of GSCs by upregulation of Kruppel-like factor 13 (KLF13), a tumor suppressor gene, through clofoctol's targeted binding protein, Upstream of N-ras (UNR). Collectively, these data demonstrated that induction of KLF13 expression suppressed growth of gliomas and provided a potential therapy for gliomas targeting GSCs. Importantly, our results also identified the RNA-binding protein UNR as a drug target.
Insights
The antibiotic clofoctol effectively targets glioma stem cells (GSCs), inhibiting tumor growth and recurrence. This study identifies clofoctol as a promising therapy for brain gliomas by upregulating the KLF13 tumor suppressor gene.
Area of Science:
- Neuro-oncology
- Cancer Biology
- Drug Discovery
Background:
- Gliomas are aggressive brain tumors with poor patient prognosis despite extensive treatment.
- Glioma stem cells (GSCs) are implicated in therapeutic resistance and tumor recurrence, driving poor outcomes.
- Targeting GSCs presents a promising strategy for improving glioma treatment efficacy.
Purpose of the Study:
- To identify novel therapeutic agents targeting GSCs.
- To elucidate the mechanism of action for potential anti-glioma drugs.
- To evaluate the efficacy of identified compounds in preclinical glioma models.
Main Methods:
- High-throughput drug screening using GSCs as a cellular model.
- In vitro assays assessing colony formation and apoptosis induction in GSCs.
- In vivo efficacy studies using patient-derived xenografts (PDXs) and transgenic glioma models.
- Mechanistic studies involving gene expression analysis and protein-binding assays.
Main Results:
- Clofoctol was identified as a potent inhibitor of GSCs, reducing colony formation and inducing apoptosis.
- Clofoctol treatment significantly suppressed tumor growth in vivo, particularly in PDX and transgenic models.
- The mechanism involves clofoctol upregulating the tumor suppressor Kruppel-like factor 13 (KLF13) via binding to the RNA-binding protein Upstream of N-ras (UNR).
Conclusions:
- Clofoctol demonstrates significant therapeutic potential for treating gliomas by targeting GSCs.
- Upregulation of KLF13, mediated by UNR, is a key mechanism for clofoctol's anti-glioma activity.
- UNR represents a novel drug target for developing future glioma therapies.
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Cells Coordinate Growth and Proliferation
Adult Stem Cells
Abnormal Proliferation
Embryonic Stem Cells
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