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EMUlator: An Elementary Metabolite Unit (EMU) Based Isotope Simulator Enabled by Adjacency Matrix.

Chao Wu1, Chia-Hsin Chen2, Jonathan Lo1

  • 1National Renewable Energy Laboratory, Golden, CO, United States.

Frontiers in Microbiology
|May 23, 2019
PubMed
Summary

We developed EMUlator, a Python tool for metabolic flux analysis using stable isotopes. This simulator simplifies complex isotope modeling, enabling better understanding of microbial metabolism.

Keywords:
Clostridium acetobutylicumadjacency matrixelementary metabolite unit (EMU)fractional labeling (FL)phosphoketolase

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