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Stoichiometric quantification of spatially dense assemblies with qPAINT
Matthew A B Baker1, Daniel J Nieves2, Geva Hilzenrat2
1School of Biotechnology and Biomolecular Sciences, The University of New South Wales, Sydney, New South Wales, Australia and European Molecular Biology Laboratory Australia Node for Single Molecule Science, School of Medical Sciences, The University of New South Wales, Sydney, New South Wales, Australia. lawrence.lee@unsw.edu.au.
Abstract:
Quantitative PAINT (qPAINT) is a useful method for counting well-separated molecules within nanoscale assemblies. But whether cross-reactivity in densely-packed arrangements perturbs measurements is unknown. Here we establish that qPAINT measurements are robust even when target molecules are separated by as little as 3 nm, sufficiently close that single-stranded DNA binding sites can interact.
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