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Updated: Jan 24, 2026

Isolation of microRNAs from Tick Ex Vivo Salivary Gland Cultures and Extracellular Vesicles
Published on: April 6, 2022
TRAF6 Plays a Proviral Role in Tick-Borne Flavivirus Infection through Interaction with the NS3 Protease
Brian H Youseff1, Thomas G Brewer1, Kristin L McNally2
1Department of Medical Microbiology and Immunology, University of Toledo College of Medicine and Life Sciences, Toledo, OH 43614, USA.
Abstract:
Tick-borne flaviviruses (TBFVs) can cause life-threatening encephalitis and hemorrhagic fever. To identify virus-host interactions that may be exploited as therapeutic targets, we analyzed the TBFV polyprotein in silico for antiviral protein-binding motifs. We obtained two putative tumor necrosis factor receptor-associated factor 6 (TRAF6)-binding motifs (TBMs) within the protease domain of the viral nonstructural 3 (NS3) protein. Here, we show that TBFV NS3 interacted with TRAF6 during infection and that TRAF6 supports TBFV replication. The proviral role of TRAF6 was not seen with mosquito-borne flaviviruses, consistent with the lack of conserved TBMs. Mutation of the second TBM within NS3 disrupted TRAF6 binding, coincident with reduced abundance of mature, autocatalytically derived form of the NS3 protease and significant virus attenuation in vitro. Our studies reveal insights into how flaviviruses exploit innate immunity for the purpose of viral replication and identify a potential target for therapeutic design.
Insights
Tick-borne flaviviruses (TBFVs) hijack host TRAF6 protein via NS3 to replicate. Inhibiting this interaction could lead to new antiviral therapies for encephalitis and hemorrhagic fever.
Area of Science:
- Virology
- Immunology
- Molecular Biology
Background:
- Tick-borne flaviviruses (TBFVs) cause severe neurological and hemorrhagic diseases.
- Understanding virus-host interactions is crucial for developing antiviral therapies.
Purpose of the Study:
- To identify virus-host interactions exploitable for therapeutic targets.
- To investigate the role of tumor necrosis factor receptor-associated factor 6 (TRAF6) in TBFV replication.
Main Methods:
- In silico analysis of the TBFV polyprotein for protein-binding motifs.
- Experimental validation of TBFV NS3 and TRAF6 interaction during infection.
- Site-directed mutagenesis of TRAF6-binding motifs (TBMs) in NS3.
Main Results:
- Two putative TRAF6-binding motifs (TBMs) were identified in the TBFV NS3 protein.
- TBFV NS3 directly interacts with TRAF6, which supports viral replication.
- Mutation of a key TBM in NS3 disrupted TRAF6 binding, reduced mature NS3 protease, and attenuated virus in vitro.
- This proviral role of TRAF6 was specific to TBFVs, not mosquito-borne flaviviruses.
Conclusions:
- Flaviviruses exploit innate immune factors like TRAF6 for replication.
- The TBFV NS3-TRAF6 interaction is a potential therapeutic target.
- Targeting this interaction may offer a strategy for treating TBFV infections.
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