Related Experiment Video
Updated: Jan 24, 2026

A Robust Discovery Platform for the Identification of Novel Mediators of Melanoma Metastasis
Published on: March 8, 2022
Runx2 stimulates neoangiogenesis through the Runt domain in melanoma
Daniela Cecconi1, Jessica Brandi1, Marcello Manfredi2
1Department of Biotechnology, Mass Spectrometry & Proteomics Lab, University of Verona, Verona, Italy.
Abstract:
Runx2 is a transcription factor involved in melanoma cell migration and proliferation. Here, we extended the analysis of Runt domain of Runx2 in melanoma cells to deepen understanding of the underlying mechanisms. By the CRISPR/Cas9 system we generated the Runt KO melanoma cells 3G8. Interestingly, the proteome analysis showed a specific protein signature of 3G8 cells related to apoptosis and migration, and pointed out the involvement of Runt domain in the neoangiogenesis process. Among the proteins implicated in angiogenesis we identified fatty acid synthase, chloride intracellular channel protein-4, heat shock protein beta-1, Rho guanine nucleotide exchange factor 1, D-3-phosphoglycerate dehydrogenase, myosin-1c and caveolin-1. Upon querying the TCGA provisional database for melanoma, the genes related to these proteins were found altered in 51.36% of total patients. In addition, VEGF gene expression was reduced in 3G8 as compared to A375 cells; and HUVEC co-cultured with 3G8 cells expressed lower levels of CD105 and CD31 neoangiogenetic markers. Furthermore, the tube formation assay revealed down-regulation of capillary-like structures in HUVEC co-cultured with 3G8 in comparison to those with A375 cells. These findings provide new insight into Runx2 molecular details which can be crucial to possibly propose it as an oncotarget of melanoma.
Insights
Runx2
Area of Science:
- Molecular Biology
- Cancer Research
- Cell Biology
Background:
- Runx2 is a transcription factor influencing melanoma cell migration and proliferation.
- Understanding the Runt domain of Runx2 in melanoma is crucial for mechanism elucidation.
Purpose of the Study:
- To investigate the role of the Runx2 Runt domain in melanoma.
- To identify molecular mechanisms underlying Runx2's function in melanoma.
Main Methods:
- CRISPR/Cas9 gene editing to create Runt knockout (KO) melanoma cells (3G8).
- Proteome analysis of 3G8 cells.
- TCGA database query for gene alterations.
- VEGF gene expression analysis.
- Co-culture assays with HUVECs (Human Umbilical Vein Endothelial Cells).
- Tube formation assay.
Main Results:
- Proteome analysis revealed a distinct protein signature in 3G8 cells linked to apoptosis and migration.
- The Runx2 Runt domain is implicated in neoangiogenesis.
- Genes related to identified angiogenesis proteins are altered in 51.36% of melanoma patients in TCGA.
- VEGF expression was reduced in 3G8 cells compared to A375 cells.
- HUVECs co-cultured with 3G8 cells showed reduced expression of neoangiogenetic markers (CD105, CD31).
- Tube formation assay demonstrated decreased capillary-like structures when HUVECs were co-cultured with 3G8 cells.
Conclusions:
- The Runx2 Runt domain plays a significant role in melanoma neoangiogenesis.
- Runx2 may be a potential oncotarget for melanoma treatment.
- These findings offer novel molecular insights into Runx2's function in melanoma.
Related Concept Videos
Conservation of Protein Domains Over Different Proteins
A limited set of protein domains often duplicate and recombine during evolution. These domains can be organized in different combinations to...
Three-Domain System of Life
Membrane Domains
Protein Domains
The membrane comprises a group of distinct proteins responsible for carrying out a cell's specific function. For example, the plasma membrane of the human sperm, or a single germ cell, contains a unique set of proteins in the...
Three Developmental Domains
Physical Development
Physical processes, also known as maturation, encompass the biological changes that occur across an individual's life. These changes begin with genetic inheritance and continue through various stages, including growth in height and weight,...
Conservation of Protein Domains
Linear Approximation in Frequency Domain
In contrast, nonlinear systems do not inherently possess these properties. However, for small deviations around an operating point, a nonlinear system can often be approximated as linear....

