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Related Concept Videos

Affinity Chromatography01:03

Affinity Chromatography

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Affinity chromatography is a powerful technique extensively utilized for separating and purifying specific biomolecules from complex mixtures. It capitalizes on the highly selective binding between an analyte and its counterpart, such as antibody-antigen interactions. The counterpart is immobilized on the stationary phase, forming an affinity column. The stationary phase typically consists of solid support, such as agarose or porous glass beads, immobilizing the affinity ligand. The mobile...
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Related Experiment Video

Updated: Jan 24, 2026

Identification of Inositol Phosphate or Phosphoinositide Interacting Proteins by Affinity Chromatography Coupled to Western Blot or Mass Spectrometry
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Small molecule target identification using photo-affinity chromatography.

Seung-Yong Seo1, Timothy W Corson2

  • 1College of Pharmacy, Gachon University, Incheon, South Korea.

Methods in Enzymology
|June 4, 2019
PubMed
Summary
This summary is machine-generated.

Photo-affinity pulldown is a practical method for identifying protein targets of small molecules in chemical biology. This protocol details a versatile approach applicable to various tissues and target identification challenges.

Keywords:
BiotinClick chemistryInhibitorMass spectrometryNatural productOff-targetPhotoreactive groupSmall moleculeSynthetic chemistryTarget identification

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Area of Science:

  • Chemical biology
  • Drug discovery
  • Proteomics

Background:

  • Identifying protein targets of bioactive small molecules is crucial for chemical biology and drug discovery.
  • Traditional affinity pulldown methods are practical but require specific probe synthesis.

Purpose of the Study:

  • To provide a detailed protocol for photo-affinity pulldown experiments.
  • To highlight the general applicability of this technique for target identification.

Main Methods:

  • Synthesis of affinity probes with crosslinking moieties.
  • Application of photo-affinity pulldown to diverse tissue types.
  • Performing experiments with minimal specialized equipment.

Main Results:

  • Demonstration of a robust photo-affinity pulldown protocol.
  • Adaptability of the method across various biological samples.
  • Successful target identification using the described approach.

Conclusions:

  • Photo-affinity pulldown is a versatile and accessible technique for protein target identification.
  • The protocol facilitates broad application in chemical biology and drug discovery research.
  • This method offers a practical solution for identifying bioactive small molecule targets.