Related Experiment Video
Updated: Jan 23, 2026

11:48
Detection of Alternative Splicing During Epithelial-Mesenchymal Transition
Published on: October 9, 2014
13.3K
Domain-specific CD6 monoclonal antibodies identify CD6 isoforms generated by alternative-splicing
Rita F Santos1,2,3, Liliana Oliveira1,2, Marion H Brown4
1i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto, Portugal.
Immunology
|June 5, 2019
Summary
Monoclonal antibodies (mAbs) now identify specific scavenger receptor cysteine-rich (SRCR) domains of CD6 glycoprotein. This research confirms CD6 domain 2 recognition and CD6 domain 3 blocking of CD166 interaction.
Area of Science:
- Immunology
- Molecular Biology
- Cell Biology
Background:
- CD6 glycoprotein is a transmembrane receptor crucial for T-cell function.
- Characterizing CD6 structure and interactions is vital for understanding T-cell regulation.
- Monoclonal antibodies (mAbs) have aided in studying CD6's scavenger receptor cysteine-rich (SRCR) domains.
Purpose of the Study:
- To definitively characterize the CD6 glycoprotein's ectodomain architecture and extracellular interactions.
- To identify specific binding sites for CD6 mAbs within its SRCR domains.
- To investigate the functional consequences of alternative splicing on CD6 isoforms and CD166 binding.
Main Methods:
- Utilized engineered CD6 isoforms, both membrane-bound and soluble, lacking specific SRCR domains.
- Employed CD6 mAbs (OX125, OX126, OX124) to probe domain recognition.
- Analyzed CD6 isoform expression at mRNA and protein levels following T-cell activation.
Main Results:
- Conclusively demonstrated that CD6 mAbs OX125 and OX126 recognize CD6 domain 2.
- Confirmed that CD6 mAb OX124 targets CD6 domain 3 and blocks CD166 interaction.
- Identified and confirmed the expression of the CD6Δd3 isoform, lacking the CD166-binding domain, after T-cell activation.
Conclusions:
- Established precise mapping of CD6 mAbs to specific SRCR domains, enhancing CD6 characterization.
- Provided definitive evidence for CD6 domain 2 recognition and CD6 domain 3's role in CD166 binding.
- Confirmed the prevalence of the CD6Δd3 isoform post-T-cell activation, impacting CD166 interactions.
Related Concept Videos
Alternative RNA Splicing
24.7K
Alternative RNA splicing is the regulated splicing of exons and introns to produce different mature mRNAs from a single pre-mRNA. Unlike in constitutive splicing where a single gene produces a single type of mRNA, alternative splicing allows an organism to produce multiple proteins from a single gene and plays an important role in protein diversity.
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
24.7K
Alternative RNA Splicing
5.0K
5.0K
RNA Splicing
60.4K
Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
60.4K
Electric Generator: Alternator
3.3K
Electric generators induce an emf by rotating a coil in a magnetic field. A simple alternator is an AC generator that creates electrical energy that varies sinusoidally with time. A simple alternator consists of a conducting loop that is placed inside a uniform magnetic field. The loop is connected to split rings connected to the external circuit with the help of brushes.
The magnetic flux passing through the coil varies sinusoidally as the loop rotates inside the magnetic field. This...
The magnetic flux passing through the coil varies sinusoidally as the loop rotates inside the magnetic field. This...
3.3K
Conservation of Protein Domains Over Different Proteins
14.1K
Protein domains are small structurally independent units that are part of a single amino acid chain. Although these domains are often structurally independent, they may rely on synergistic effects to perform their functions as part of a larger protein. Protein domains may be conserved within the same organism, as well as across different organisms.
A limited set of protein domains often duplicate and recombine during evolution. These domains can be organized in different combinations to...
A limited set of protein domains often duplicate and recombine during evolution. These domains can be organized in different combinations to...
14.1K
Antibody Structure
65.4K
Overview
Antibodies, also known as immunoglobulins (Ig), are essential players of the adaptive immune system. These antigen-binding proteins are produced by B cells and make up 20 percent of the total blood plasma by weight. In mammals, antibodies fall into five different classes, which each elicits a different biological response upon antigen binding.
The Y-Shaped Structure of Antibodies Consists of Four Polypeptide Chains
Antibodies consist of four polypeptide chains: two identical heavy...
Antibodies, also known as immunoglobulins (Ig), are essential players of the adaptive immune system. These antigen-binding proteins are produced by B cells and make up 20 percent of the total blood plasma by weight. In mammals, antibodies fall into five different classes, which each elicits a different biological response upon antigen binding.
The Y-Shaped Structure of Antibodies Consists of Four Polypeptide Chains
Antibodies consist of four polypeptide chains: two identical heavy...
65.4K

