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Published on: January 21, 2020
Identification of microRNAs associated with the aggressiveness of prolactin pituitary tumors using bioinformatic
Zihao Wang1, Lu Gao1, Xiaopeng Guo1
1Department of Neurosurgery, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Dongcheng, Beijing 100730, P.R. China.
Abstract:
Aggressive prolactin pituitary tumors, which exhibit aggressive behaviors and resistance to conventional treatments, are a huge challenge for neurosurgeons. Many studies have investigated the roles of microRNAs (miRNAs) in pituitary tumorigenesis, invasion and metastasis, but few have explored aggressiveness‑associated miRNAs in aggressive pituitary tumors. Differentially expressed miRNAs (DEMs) between aggressive and nonaggressive prolactin pituitary tumors were screened using the GSE46294 miRNA expression profile downloaded from the GEO database. The potential target genes of the top three most highly upregulated and downregulated DEMs were predicted by miRTarBase, and potential functional annotation and pathway enrichment analysis were performed using the DAVID database. Protein‑protein interaction (PPI) and miRNA‑hub gene interaction networks were constructed by Cytoscape software. A total of 43 DEMs were identified, including 19 upregulated and 24 downregulated miRNAs, between aggressive and nonaggressive prolactin pituitary tumors. One hundred and seventy and 680 target genes were predicted for the top three most highly upregulated and downregulated miRNAs, respectively, and these genes were involved in functional enrichment pathways, such as regulation of transcription from RNA polymerase II promoter, DNA‑templated transcription, Wnt signaling pathway, protein binding, and transcription factor activity (sequence‑specific DNA binding). In the PPI network, the top 10 genes with the highest degree of connectivity of the upregulated and downregulated DEMs were selected as hub genes. By constructing an miRNA‑hub gene network, it was found that most hub genes were potentially modulated by hsa‑miR‑489 and hsa‑miR‑520b. Targeting hsa‑miR‑489 and hsa‑miR‑520b may provide new clues for the diagnosis and treatment of aggressive prolactin pituitary tumors.
Insights
Aggressive prolactin pituitary tumors are challenging. This study identified 43 differentially expressed microRNAs (miRNAs), highlighting hsa-miR-489 and hsa-miR-520b as potential therapeutic targets for these aggressive tumors.
Area of Science:
- Endocrinology
- Oncology
- Molecular Biology
Background:
- Aggressive prolactin pituitary tumors present significant clinical challenges due to treatment resistance.
- MicroRNAs (miRNAs) are implicated in pituitary tumor development, but specific aggressiveness-associated miRNAs remain underexplored.
Purpose of the Study:
- To identify differentially expressed miRNAs (DEMs) between aggressive and nonaggressive prolactin pituitary tumors.
- To predict target genes and pathways associated with aggressive pituitary tumors.
- To construct interaction networks to identify key regulatory miRNAs.
Main Methods:
- Screening of miRNA expression profiles (GSE46294) from the GEO database.
- Prediction of miRNA target genes using miRTarBase and functional enrichment analysis via DAVID.
- Construction of protein-protein interaction (PPI) and miRNA-hub gene networks using Cytoscape.
Main Results:
- Identification of 43 DEMs (19 upregulated, 24 downregulated) between aggressive and nonaggressive tumors.
- Enrichment analysis revealed involvement in transcription regulation and Wnt signaling pathways.
- hsa-miR-489 and hsa-miR-520b were identified as key modulators of hub genes in the miRNA-hub gene network.
Conclusions:
- Specific miRNAs are differentially expressed in aggressive prolactin pituitary tumors.
- hsa-miR-489 and hsa-miR-520b represent promising targets for novel diagnostic and therapeutic strategies.
- Further investigation into these miRNAs could improve management of aggressive pituitary tumors.
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