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Integration of Bioinformatics Approaches and Experimental Validations to Understand the Role of Notch Signaling in Ovarian Cancer
Published on: January 12, 2020
NOTCH2/NOTCH3/DLL3/MAML1/ADAM17 signaling network is associated with ovarian cancer
Dongyu Jia1,2, Jesse Underwood1, Qiuping Xu3
1Department of Biology, Georgia Southern University, Statesboro, GA 30460, USA.
Abstract:
Notch signaling is well-known for its role in regulating cell self-renewal and differentiation. Within the cancer research field, it has been identified that dysregulated Notch signaling is involved directly with various types of cancer. Although Notch signaling is generally considered as oncogenic, it sometimes acts as a tumor suppressor, highlighting the complexity of the role of Notch in cancer. A number of studies have associated Notch signaling components with ovarian cancer, but the underlying molecular mechanisms are not well-elucidated. In the present study, the roles of main components of Notch signaling in ovarian cancer were systematically analyzed through large data portals, including Prediction of Clinical Outcomes from Genomic Profiles, Gene Expression across Normal and Tumor tissue, CSIOVDB, Broad Institute Cancer Cell Line Encyclopedia and cBioPortal. Upregulated expression of proteins in the Notch signaling pathway components in ovarian cancer was identified to be generally associated with poor overall and disease-free survival time, and more advanced cancer stages. In addition, Notch components were enriched in ovarian cancer tissues and cell lines. These results led to a proposed neurogenic locus notch homolog protein (NOTCH)2/NOTCH3/Delta-like protein 3/Mastermind-like protein 1/a disintegrin and metalloproteinase domain-containing protein 17 network. Anticancer drugs, developed to target this network, may have high specificity in treating Notch-associated ovarian cancer.
Insights
Dysregulated Notch signaling impacts ovarian cancer progression. Targeting the NOTCH2/NOTCH3 network may offer specific anticancer therapies for ovarian cancer.
Area of Science:
- Molecular biology
- Cancer research
- Genomics
Background:
- Notch signaling regulates cell functions and is implicated in various cancers.
- Its role in cancer is complex, acting as both oncogenic and tumor-suppressive.
- Notch signaling components are linked to ovarian cancer, but mechanisms remain unclear.
Purpose of the Study:
- To systematically analyze the roles of main Notch signaling components in ovarian cancer.
- To investigate the association between Notch signaling and ovarian cancer progression and survival.
- To propose a specific Notch signaling network involved in ovarian cancer.
Main Methods:
- Analysis of Notch signaling components using large-scale data portals (e.g., cBioPortal, GEPIA).
- Correlation of protein expression with clinical outcomes (overall survival, disease-free survival) and cancer stage.
- Identification of enriched Notch components in ovarian cancer tissues and cell lines.
Main Results:
- Upregulated Notch signaling proteins correlate with poor overall and disease-free survival.
- Elevated Notch component expression is associated with advanced ovarian cancer stages.
- Notch pathway components are significantly enriched in ovarian cancer tissues and cell lines.
Conclusions:
- A specific Notch2/Notch3/DLL3/MAML1/ADAM17 network is proposed for ovarian cancer.
- Targeting this identified network with anticancer drugs may provide high specificity for ovarian cancer treatment.
- Further research into Notch signaling's role can lead to novel therapeutic strategies for ovarian cancer.
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