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Updated: Jan 23, 2026

Exploring m6A and m5C Epitranscriptomes upon Viral Infection: an Example with HIV
Published on: March 5, 2022
Significant epitranscriptomes in heterogeneous cancer
Masamitsu Konno1, Masateru Taniguchi2, Hideshi Ishii3
1Department of Frontier Science for Cancer and Chemotherapy, Graduate School of Medicine, Osaka University, Osaka, Japan.
Abstract:
Precision medicine places significant emphasis on techniques for the identification of DNA mutations and gene expression by deep sequencing of gene panels to obtain medical data. However, other diverse information that is not easily readable using bioinformatics, including RNA modifications, has emerged as a novel diagnostic and innovative therapy owing to its multifunctional aspects. It is suggested that this breakthrough innovation might open new avenues for the elucidation of uncharacterized cancer cellular functions to develop more precise medical applications. The functional characteristics and regulatory mechanisms of RNA modifications, ie, the epitranscriptome (ETR), which reflects RNA metabolism, remains unclear, mainly due to detection methods being limited. Recent studies have revealed that N6-methyl adenosine, the most common modification in mRNA in eukaryotes, is affected in various types of cancer and, in some cases, cancer stem cells, but also affects cellular responses to viral infections. The ETR can control cancer cell fate through mRNA splicing, stability, nuclear export, and translation. Here we report on the recent progress of ETR detection methods, and biological findings regarding the significance of ETR in cancer precision medicine.
Insights
The epitranscriptome (ETR), or RNA modifications, offers new insights into cancer biology and precision medicine. Understanding ETR detection and its role in cancer is crucial for developing innovative therapies.
Area of Science:
- Molecular Biology
- Genomics
- Cancer Research
Background:
- Precision medicine heavily relies on DNA sequencing for mutations and gene expression.
- RNA modifications, such as N6-methyl adenosine, are increasingly recognized for their role in cancer and viral infections.
- The epitranscriptome (ETR) influences RNA metabolism, but its mechanisms and detection remain challenging.
Purpose of the Study:
- To review recent advancements in epitranscriptome (ETR) detection methods.
- To explore the biological significance of ETR in the context of cancer precision medicine.
- To highlight the potential of ETR for novel diagnostic and therapeutic strategies in oncology.
Main Methods:
- Review of current literature on epitranscriptome (ETR) detection techniques.
- Analysis of biological findings linking ETR to cancer development and progression.
- Discussion of the impact of ETR on RNA processing, stability, and translation.
Main Results:
- N6-methyl adenosine, a key epitranscriptome mark, is altered in various cancers and affects cellular responses.
- The epitranscriptome (ETR) regulates cancer cell fate via mRNA splicing, stability, nuclear export, and translation.
- Progress in ETR detection methods is enabling deeper understanding of its role in cancer.
Conclusions:
- The epitranscriptome (ETR) represents a promising frontier for cancer precision medicine.
- Improved ETR detection methods are essential for unlocking its diagnostic and therapeutic potential.
- Understanding ETR mechanisms can lead to novel therapeutic targets and personalized cancer treatments.
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