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Multi-slice passband bSSFP for human and rodent fMRI at ultra-high field
Olivier Reynaud1, Analina R da Silva1, Rolf Gruetter1
1Centre d'Imagerie Biomédicale, Ecole Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
Abstract:
Balanced steady-state free precession (bSSFP) can be used as an alternative to gradient-echo (GE) EPI for BOLD functional MRI when image distortions and signal drop-outs are severe such as at ultra-high field. However, 3D-bSSFP acquisitions have distinct drawbacks on either human or animal MR systems. On clinical scanners, 3D imaging is suboptimal for localized fMRI applications. It can also display distortions when acceleration methods such as spiral read-outs are used, and, compared to multi-slice acquisitions, suffers from increased sensitivity to motion or physiological noise which further results in blurring. On pre-clinical systems, 3D acquisitions have low temporal resolution due to limited acceleration options, while single slice often results in insufficient coverage. The aim of the present study was to implement a multi-slice bSSFP acquisition with Cartesian read-out to obtain non-distorted BOLD fMRI activation maps in the human and rat brain at ultra-high field. We show that, when using a new pseudo-steady-state, the bSSFP signal characteristics are preserved. In the human brain at 7 T, we demonstrate that both task- and resting-state fMRI can be performed with multi-slice bSSFP, with a temporal SNR that matches that of 3D-bSSFP, resulting in - at least - equal performance. In the rat brain at 14 T, we show that the multi-slice bSSFP protocol has similar sensitivity to gradient-echo EPI for task fMRI, while benefitting from much reduced distortions and drop-outs. The advantages of passband bSSFP at 14 T in comparison with GE-EPI are expected to be even more marked for mouse brain.
Insights
This study introduces a multi-slice balanced steady-state free precession (bSSFP) method for functional MRI (fMRI). This technique reduces distortions and signal drop-outs, offering comparable performance to existing methods in human and rat brains at ultra-high fields.
Area of Science:
- Magnetic Resonance Imaging
- Neuroimaging
- Biophysics
Background:
- Gradient-echo (GE) Echo-Planar Imaging (EPI) for BOLD fMRI suffers from distortions and signal drop-outs at ultra-high fields.
- Existing 3D bSSFP methods have limitations in human (suboptimal localization, motion sensitivity) and animal (low temporal resolution, insufficient coverage) neuroimaging.
Purpose of the Study:
- To implement and validate a multi-slice bSSFP acquisition with Cartesian read-out for non-distorted BOLD fMRI at ultra-high fields.
- To evaluate its performance in human and rat brains for both task- and resting-state fMRI.
Main Methods:
- Development of a multi-slice bSSFP sequence with a novel pseudo-steady-state for preserved signal characteristics.
- Acquisition of BOLD fMRI data in the human brain at 7 Tesla and the rat brain at 14 Tesla.
- Comparison of multi-slice bSSFP with 3D bSSFP and GE-EPI in terms of image quality, temporal signal-to-noise ratio (SNR), and sensitivity.
Main Results:
- The multi-slice bSSFP sequence successfully produced non-distorted BOLD fMRI activation maps in both human and rat brains.
- In humans (7 T), multi-slice bSSFP achieved temporal SNR comparable to 3D bSSFP for task and resting-state fMRI.
- In rats (14 T), multi-slice bSSFP demonstrated similar sensitivity to GE-EPI for task fMRI, with significantly reduced distortions and signal drop-outs.
Conclusions:
- Multi-slice bSSFP with Cartesian read-out is a viable alternative to GE-EPI and 3D bSSFP for ultra-high field BOLD fMRI.
- This method offers improved image quality by minimizing distortions and signal drop-outs, particularly beneficial for pre-clinical research.
- The technique shows promise for enhanced neuroimaging applications in both human and animal models.
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