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Updated: Jan 23, 2026

Next Generation Sequencing for the Detection of Actionable Mutations in Solid and Liquid Tumors
Published on: September 20, 2016
New Challenges in Tumor Mutation Heterogeneity in Advanced Ovarian Cancer by a Targeted Next-Generation Sequencing
Marica Garziera1, Rossana Roncato2, Marcella Montico3
1Experimental and Clinical Pharmacology Unit, Centro di Riferimento Oncologico (CRO), IRCCS, 33081 Aviano, Italy. mgarziera@cro.it.
Abstract:
Next-generation sequencing (NGS) technology has advanced knowledge of the genomic landscape of ovarian cancer, leading to an innovative molecular classification of the disease. However, patient survival and response to platinum-based treatments are still not predictable based on the tumor genetic profile. This retrospective study characterized the repertoire of somatic mutations in advanced ovarian cancer to identify tumor genetic markers predictive of platinum chemo-resistance and prognosis. Using targeted NGS, 79 primary advanced (III-IV stage, tumor grade G2-3) ovarian cancer tumors, including 64 high-grade serous ovarian cancers (HGSOCs), were screened with a 26 cancer-genes panel. Patients, enrolled between 1995 and 2011, underwent primary debulking surgery (PDS) with optimal residual disease (RD < 1 cm) and platinum-based chemotherapy as first-line treatment. We found a heterogeneous mutational landscape in some uncommon ovarian histotypes and in HGSOC tumor samples with relevance in predicting platinum sensitivity. In particular, we identified a poor prognostic signature in patients with HGSOC harboring concurrent mutations in two driver actionable genes of the panel. The tumor heterogeneity described, sheds light on the translational potential of targeted NGS approach for the identification of subgroups of patients with distinct therapeutic vulnerabilities, that are modulated by the specific mutational profile expressed by the ovarian tumor.
Insights
Next-generation sequencing identified a poor prognostic signature in ovarian cancer patients with concurrent mutations in two driver genes. This finding highlights the potential of targeted sequencing to predict platinum resistance and guide treatment strategies.
Area of Science:
- Oncology
- Genomics
- Molecular Biology
Background:
- Next-generation sequencing (NGS) has improved understanding of ovarian cancer genomics and molecular classification.
- Predicting patient survival and response to platinum-based chemotherapy remains challenging based on current genetic profiles.
Purpose of the Study:
- To identify tumor genetic markers that predict platinum chemo-resistance and prognosis in advanced ovarian cancer.
- To characterize the somatic mutation repertoire in ovarian tumors using targeted NGS.
Main Methods:
- Retrospective analysis of 79 advanced ovarian cancer tumors (including 64 high-grade serous ovarian cancers) using a 26 cancer-gene panel via targeted NGS.
- Patients underwent primary debulking surgery and first-line platinum-based chemotherapy between 1995 and 2011.
Main Results:
- A heterogeneous mutational landscape was observed in both uncommon ovarian histotypes and high-grade serous ovarian cancer (HGSOC) samples.
- A poor prognostic signature was identified in HGSOC patients with concurrent mutations in two specific driver actionable genes.
- Tumor heterogeneity influences platinum sensitivity and overall prognosis.
Conclusions:
- Targeted NGS can identify patient subgroups with distinct therapeutic vulnerabilities based on their specific mutational profile.
- The identified genetic signature holds translational potential for predicting treatment response and prognosis in ovarian cancer.
- Further research into tumor heterogeneity is crucial for personalized ovarian cancer therapy.
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