Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Synthetic Biology02:55

Synthetic Biology

5.5K
Synthetic biology is an interdisciplinary science that involves using principles from disciplines such as engineering, molecular biology, cell biology, and systems biology. It involves remodeling existing organisms from nature or constructing completely new synthetic organisms for applications such as protein or enzyme production, bioremediation, value-added macromolecule production, and the addition of desirable traits to crops, to name a few.
Golden rice
Golden rice is a genetically modified...
5.5K
Visual System01:26

Visual System

1.7K
Light enters the eye through the cornea, a transparent, dome-shaped surface covering the surface of the eyeball that helps to direct and focus incoming light. This light is then channeled toward the pupil, an adjustable opening whose size is controlled by the iris. The iris, a pigmented muscle, regulates the amount of light entering the eye by contracting or dilating the pupil, thereby ensuring optimal light levels for clear vision.
Once through the pupil, the light passes through the lens, a...
1.7K
Language01:16

Language

898
Language is a unique communication system that uses words and systematic rules to organize and transmit information. Unlike other forms of communication, which may involve postures, movements, odors, or vocalizations, language relies on symbols and grammar. This makes human communication distinct from that of other species, who also communicate but do not use language in the same way humans do.
Corballis and Suddendorf (2007) and Tomasello and Rakoczy (2003) highlight the role of language in...
898
Visual Agnosia01:12

Visual Agnosia

1.0K
Visual agnosia is a condition characterized by the inability to recognize visually presented objects despite having normal vision. For instance, a person with visual agnosia can describe the shape and color of an object but cannot identify or name it. This impairment does not affect their visual field, acuity, color vision, brightness discrimination, language, or memory. An example of this condition in a social setting is someone at a dinner party asking for "that silver thing with a round...
1.0K
Photoreceptors and Visual Pathways01:22

Photoreceptors and Visual Pathways

8.9K
At the molecular level, visual signals trigger transformations in photopigment molecules, resulting in changes in the photoreceptor cell's membrane potential. The photon's energy level is denoted by its wavelength, with each specific wavelength of visible light associated with a distinct color. The spectral range of visible light, classified as electromagnetic radiation, spans from 380 to 720 nm. Electromagnetic radiation wavelengths exceeding 720 nm fall under the infrared category,...
8.9K
Components of Language01:24

Components of Language

796
Language, whether spoken, signed, or written, consists of specific components: lexicon and grammar. The lexicon is the vocabulary of a language, comprising its words. Grammar is the set of rules used to convey meaning through the lexicon. For example, English grammar adds “-ed” to most verbs to indicate past tense. Words are formed by combining phonemes, which are the basic sound units of a language. Different languages have different sets of phonemes (e.g., “ah” vs.
796

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Consumption of the degradation products of nylon 6 and nylon 6,6 as the sole carbon and nitrogen source by engineered Acinetobacter baylyi.

Metabolic engineering·2026
Same author

drGT: Interpretable Drug Response Prediction with Attention-Guided Gene Attribution on a Drug-Cell-Gene Heterogeneous Graph.

BMC bioinformatics·2026
Same author

TRPM4 Expression as a Predictive Biomarker and a Mechanistic Driver of Acetalax Activity in Prostate Cancer: Preclinical Efficacy Studies.

Molecular cancer therapeutics·2026
Same author

Protecting cells at the genetic level and simulating unauthorized access via a biohackathon.

Science advances·2026
Same author

Synthetic circuits for cell ratio control.

Nature·2026
Same author

Systems biology graphical notation: process description language level 1 version 2.1.

Journal of integrative bioinformatics·2026
Same journal

Updates and validation of the Compi RNA-seq pipeline with a case study in Alzheimer's disease.

Journal of integrative bioinformatics·2026
Same journal

Fragment-level FAIRness: annotating scientific data and its provenance using data fragment selectors.

Journal of integrative bioinformatics·2026
Same journal

Integrating cross-omics research through FAIR Digital Objects with DataPLANT.

Journal of integrative bioinformatics·2026
Same journal

Pheno-App 2.0 - a mobile app for collecting phenotypic data in plant research.

Journal of integrative bioinformatics·2026
Same journal

Evolving bioinformatics services - the journey of KPI metrics with Scorpion.

Journal of integrative bioinformatics·2026
Same journal

The community engagement and empowerment cycle: FAIRagro's framework to foster cultural change towards FAIR RDM practices in agrosystem science and beyond.

Journal of integrative bioinformatics·2026
See all related articles

Related Experiment Video

Updated: Jan 23, 2026

Using Eye Movements Recorded in the Visual World Paradigm to Explore the Online Processing of Spoken Language
09:27

Using Eye Movements Recorded in the Visual World Paradigm to Explore the Online Processing of Spoken Language

Published on: October 13, 2018

10.7K

Synthetic Biology Open Language Visual (SBOL Visual) Version 2.1.

Curtis Madsen1, Angel Goni Moreno2, Zachary Palchick3

  • 1Boston University, Boston, MA, USA.

Journal of Integrative Bioinformatics
|June 15, 2019
PubMed
Summary
This summary is machine-generated.

The Synthetic Biology Open Language Visual (SBOL Visual) standard provides a unified visual language for genetic designs. Version 2.1 enhances this standard with new syntax for modularity, interactions, and genomic context.

Keywords:
DiagramsSBOL VisualStandards

More Related Videos

Eye Tracking During Visually Situated Language Comprehension: Flexibility and Limitations in Uncovering Visual Context Effects
07:36

Eye Tracking During Visually Situated Language Comprehension: Flexibility and Limitations in Uncovering Visual Context Effects

Published on: November 30, 2018

16.4K
Exploring Infant Sensitivity to Visual Language using Eye Tracking and the Preferential Looking Paradigm
06:07

Exploring Infant Sensitivity to Visual Language using Eye Tracking and the Preferential Looking Paradigm

Published on: May 15, 2019

9.0K

Related Experiment Videos

Last Updated: Jan 23, 2026

Using Eye Movements Recorded in the Visual World Paradigm to Explore the Online Processing of Spoken Language
09:27

Using Eye Movements Recorded in the Visual World Paradigm to Explore the Online Processing of Spoken Language

Published on: October 13, 2018

10.7K
Eye Tracking During Visually Situated Language Comprehension: Flexibility and Limitations in Uncovering Visual Context Effects
07:36

Eye Tracking During Visually Situated Language Comprehension: Flexibility and Limitations in Uncovering Visual Context Effects

Published on: November 30, 2018

16.4K
Exploring Infant Sensitivity to Visual Language using Eye Tracking and the Preferential Looking Paradigm
06:07

Exploring Infant Sensitivity to Visual Language using Eye Tracking and the Preferential Looking Paradigm

Published on: May 15, 2019

9.0K

Area of Science:

  • Synthetic Biology
  • Bioinformatics
  • Computational Biology

Background:

  • Visual communication is crucial in biological engineering for representing nucleic acid sequences and molecular interactions.
  • Emerging conventions for diagramming genetic designs require standardization for clarity and consistency.

Purpose of the Study:

  • To detail version 2.1 of the Synthetic Biology Open Language Visual (SBOL Visual) standard.
  • To enhance the visual language for expressing genetic designs, focusing on structure and function.

Main Methods:

  • Systematizing conventions into a coherent visual language.
  • Expanding diagram syntax to include modular structure and element mappings.
  • Introducing new glyphs for genomic context and stop codons.

Main Results:

  • SBOL Visual 2.1 builds upon SBOL Visual 2.0, offering expanded syntax for complex genetic designs.
  • New features include methods for showing modularity, interaction arrows (superposition or chemical processes), and genomic integration.
  • Additional glyphs represent genomic context and stop codons, improving the expressiveness of genetic design diagrams.

Conclusions:

  • SBOL Visual 2.1 provides a more comprehensive and standardized visual language for synthetic biology.
  • The enhanced standard facilitates clearer communication and representation of complex genetic engineering projects.