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Crop Phenomics: Current Status and Perspectives.

Chunjiang Zhao1, Ying Zhang1, Jianjun Du1

  • 1Beijing Key Lab of Digital Plant, Beijing Research Center for Information Technology in Agriculture, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China.

Frontiers in Plant Science
|June 20, 2019
PubMed
Summary
This summary is machine-generated.

Advancing crop breeding requires high-throughput phenotyping technologies, ushering in the era of phenomics. This research explores data collection, analysis, and bioinformatics to accelerate genetic gain and precision breeding.

Keywords:
crop phenomicsdata storagefunctional–structural plant modelingphenotype–genotype association analysisphenotyping extraction

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Area of Science:

  • Agricultural Science
  • Genetics
  • Bioinformatics

Background:

  • High-throughput phenotyping technologies are crucial for accelerating genetic gain in crop breeding programs.
  • The field is evolving into 'phenomics,' necessitating advanced data management and analysis.

Purpose of the Study:

  • To provide an overview of crop phenomics research, covering data collection to analysis.
  • To discuss challenges and prospects for developing new methods in precision breeding.

Main Methods:

  • Overview of phenotypic data collection using various sensors.
  • Exploration of phenomics analysis techniques.
  • Discussion of bioinformatics for extracting information from omics data.

Main Results:

  • Crop phenomics integrates multi-domain, multi-level, and multi-scale data.
  • Development of technical systems for phenotypic trait identification is essential.
  • Bioinformatics plays a key role in managing and interpreting large datasets.

Conclusions:

  • Crop phenomics offers a pathway to mine genes for important agronomic traits.
  • Intelligent solutions are needed for effective precision breeding.
  • Further research in data integration and analysis is critical for future advancements.