Analysis of Expression Patterns of MicroRNAs That Are Closely Associated With Renal Carcinogenesis
Ei Shiomi1,2, Tamotsu Sugai1, Kazuyuki Ishida1
1Department of Molecular Diagnostic Pathology, School of Medicine, Iwate Medical University, Morioka, Japan.
Abstract:
Background: MicroRNAs (miRNA) are frequently dysregulated in clear cell renal cell carcinoma (ccRCC). Objective: This study aimed to elucidate the role of miRNA expression patterns in renal carcinogenesis and to identify the specific miRNAs that exhibit expression patterns closely associated with patient outcomes. Methods: We examined the expression patterns of selected miRNAs, including miRNA-155-5p, miRNA-122-5p, miRNA-21-5p, miRNA-185-5p, miRNA-106a-5p, miRNA-106b-3p, miRNA-34b-3p, miRNA-210-3p, miRNA-141-3p, miRNA-200c-3p, miRNA-135a-5p, miRNA-30a-5p, miRNA-218-5p, miRNA-429, miRNA-200a-3p and miRNA-200b-3p, in 96 samples of ccRCCs using the TaqMan real-time PCR method. In addition, cluster analysis was performed to stratify expression patterns of multiple miRNAs. Results: In the present study, three distinct subgroups could be clearly stratified in ccRCCs. Subgroup 1 was characterized by upregulation of miRNA-155-5p, miRNA-122-5p, miRNA-21-5p, miRNA-185-5p, miRNA-106a-5p, miRNA-106b-3p, miRNA-34b-3p and miRNA-210-3p. Subgroup 2 was closely associated with downregulation of miRNA-141-3p, miRNA200c-3p, miRNA-30a-5p, miRNA-218-5p, miRNA-429, miRNA-200a-3p and miRNA-200b-3p. Moreover, significant lower expression of miRNA-135a-5p was a distinctive feature of subgroup 3, which was correlated with metachronous metastasis. Among the individual markers in subgroup 3, miRNA-135a-5p was retained in multivariate analysis. The cutoff value of miRNA-135a-5p expression to identify the association of an altered level of miRNA-135a-5p with metachronous metastasis in ccRCCs was determined and showed excellent specificity. Conclusion: We suggest that the expression pattern of the chosen miRNAs is useful to identify renal carcinogenesis and to help identify the association of such expression patterns with metachronous metastasis in ccRCCs. In addition, miRNA-135a-5p was an excellent marker for prediction of metachronous metastasis.
Insights
MicroRNA (miRNA) expression patterns in clear cell renal cell carcinoma (ccRCC) can stratify patients into subgroups. Lower expression of miRNA-135a-5p is linked to metachronous metastasis in ccRCC patients.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- MicroRNAs (miRNAs) are critical regulators of gene expression.
- Dysregulation of miRNAs is a hallmark of various cancers, including clear cell renal cell carcinoma (ccRCC).
- Understanding miRNA expression patterns can provide insights into tumor development and patient prognosis.
Purpose of the Study:
- To investigate miRNA expression profiles in ccRCC.
- To identify specific miRNAs associated with renal carcinogenesis and patient outcomes.
- To evaluate the potential of miRNA expression patterns as biomarkers for metastasis.
Main Methods:
- Real-time PCR was used to quantify the expression of 16 selected miRNAs in 96 ccRCC samples.
- Cluster analysis was employed to stratify ccRCC samples based on miRNA expression patterns.
- Multivariate analysis was performed to assess the prognostic value of individual miRNAs.
Main Results:
- Three distinct subgroups of ccRCC were identified based on miRNA expression patterns.
- Subgroup 1 showed upregulation of specific oncogenic miRNAs, while Subgroup 2 exhibited downregulation of tumor-suppressive miRNAs.
- Significantly lower expression of miRNA-135a-5p was a distinct feature of Subgroup 3 and was correlated with metachronous metastasis, showing excellent specificity in multivariate analysis.
Conclusions:
- miRNA expression patterns are valuable for understanding renal carcinogenesis in ccRCC.
- The identified miRNA expression patterns can aid in predicting metachronous metastasis in ccRCC patients.
- miRNA-135a-5p serves as a promising biomarker for the prediction of metachronous metastasis in ccRCC.
More Related Videos
05:39Detection of MicroRNA Expression in the Kidneys of Immunoglobulin A Nephropathic Mice
Published on: July 8, 2020
06:48Quantitative Real-Time Polymerase Chain Reaction Evaluation of MicroRNA Expression in Kidney and Serum of Mice with Age-Dependent Renal Impairment
Published on: April 29, 2022
Related Concept Videos
MicroRNAs
MicroRNAs
Regulation of Expression Occurs at Multiple Steps
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Factors Affecting Renal Clearance: Renal Impairment
One condition associated with renal failure is uremia. Uremia is characterized by impaired glomerular filtration and fluid accumulation in the body. This condition hinders the renal clearance of drugs, resulting in drug accumulation and potential...
Close Relationships and Culture
Fixed Action Patterns
