Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Ecological Disturbance02:26

Ecological Disturbance

20.7K
An ecological disturbance is a temporary disruption in the environment resulting from abiotic, biotic, or anthropogenic factors, causing a pronounced change in an ecosystem. The impact of an ecological disturbance, which can depend on its intensity, frequency, and spatial distribution, plays a significant role in shaping the species diversity within the ecosystem.
20.7K
Ecological Succession02:17

Ecological Succession

21.4K
Ecological succession is influenced by the processes of facilitation, inhibition, and toleration. Facilitation occurs when early successional species create more favorable ecological conditions for subsequent species, such as enhanced nutrient, water, or light availability. In contrast, inhibition happens when early successional species create unfavorable ecological conditions for potential successive species, such as limiting resource availability. In some cases, later successional species...
21.4K
What are Populations and Communities?00:30

What are Populations and Communities?

37.4K
Overview
37.4K
Ecological Niches02:02

Ecological Niches

26.1K
All organisms have a position within an ecosystem. The complete set of living and nonliving factors—including food resources, climate, and terrain—that define the position of a given organism are collectively referred to as the organism’s ecological niche.
26.1K
Community Based Intervention01:30

Community Based Intervention

287
Community-based interventions in mental health represent a paradigm shift from institution-centered care to treatments embedded within the fabric of local communities. By prioritizing inclusion and leveraging existing societal structures, this approach fosters a supportive environment conducive to addressing mental health challenges while promoting individual dignity and agency.
Foundations of Community Mental Health Programs
Central to the success of community-based interventions is the...
287
Comparing Copy Number Variations and SNPs02:26

Comparing Copy Number Variations and SNPs

18.6K
Sequencing of the human genome has opened up several best-kept secrets of the genome. Scientists have identified thousands of genome variations that exist within a population. These variations can be a single nucleotide or a larger chromosomal variation.
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
18.6K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

The elephant (bird) in the room: unknown mechanisms and unresolved impacts of low DNA yields in avian microbiome research.

Animal microbiome·2026
Same author

Vaginal Microbiome Is Associated with Breed and Pregnancy Status in Beef Cattle.

Animals : an open access journal from MDPI·2026
Same author

Archaeal diversity in the microbiomes of four wild bird species.

Microbiology spectrum·2025
Same author

Body Size Poorly Predicts Host-Associated Microbial Diversity in Wild Birds.

Microbiology spectrum·2023
Same author

Functional and Compositional Changes in the Fecal Microbiome of a Shorebird during Migratory Stopover.

mSystems·2023
Same author

Multiomics Characterization of the Canada Goose Fecal Microbiome Reveals Selective Efficacy of Simulated Metagenomes.

Microbiology spectrum·2022

Related Experiment Video

Updated: Jan 23, 2026

Characterizing Microbiome Dynamics – Flow Cytometry Based Workflows from Pure Cultures to Natural Communities
09:57

Characterizing Microbiome Dynamics – Flow Cytometry Based Workflows from Pure Cultures to Natural Communities

Published on: July 12, 2018

12.5K

Microbiomes, Community Ecology, and the Comparative Method.

Sarah M Hird1,2

  • 1Department of Molecular and Cell Biology, University of Connecticut, Storrs, Connecticut, USA sarah.hird@uconn.edu.

Msystems
|June 21, 2019
PubMed
Summary

Understanding avian microbiomes requires integrating ecological and evolutionary frameworks. This research explores host-microbiome interactions by viewing microbiomes as both communities and host traits, advancing our knowledge of host evolution and microbial biodiversity.

Keywords:
community ecologycomparative methodsevolutionmicrobiome

More Related Videos

Exploring the Root Microbiome: Extracting Bacterial Community Data from the Soil, Rhizosphere, and Root Endosphere
09:55

Exploring the Root Microbiome: Extracting Bacterial Community Data from the Soil, Rhizosphere, and Root Endosphere

Published on: May 2, 2018

28.1K
Basic Methods for the Study of Reproductive Ecology of Fish in Aquaria
07:25

Basic Methods for the Study of Reproductive Ecology of Fish in Aquaria

Published on: July 20, 2017

12.0K

Related Experiment Videos

Last Updated: Jan 23, 2026

Characterizing Microbiome Dynamics – Flow Cytometry Based Workflows from Pure Cultures to Natural Communities
09:57

Characterizing Microbiome Dynamics – Flow Cytometry Based Workflows from Pure Cultures to Natural Communities

Published on: July 12, 2018

12.5K
Exploring the Root Microbiome: Extracting Bacterial Community Data from the Soil, Rhizosphere, and Root Endosphere
09:55

Exploring the Root Microbiome: Extracting Bacterial Community Data from the Soil, Rhizosphere, and Root Endosphere

Published on: May 2, 2018

28.1K
Basic Methods for the Study of Reproductive Ecology of Fish in Aquaria
07:25

Basic Methods for the Study of Reproductive Ecology of Fish in Aquaria

Published on: July 20, 2017

12.0K

Area of Science:

  • Microbiology
  • Evolutionary Biology
  • Ecology

Background:

  • Microbiomes harbor complex biological information crucial for host interactions.
  • Integrating multi-level data enhances holistic understanding of host-microbiome dynamics.
  • Avian microbiomes offer a unique model for studying host-microbe co-evolution.

Purpose of the Study:

  • To investigate the evolution and ecology of avian microbiomes.
  • To apply complementary frameworks: microbiome as a community and as a host trait.
  • To integrate ecological and evolutionary theories for a comprehensive understanding of host-associated microbes.

Main Methods:

  • Utilizing classic ecological and evolutionary theories.
  • Employing modern statistical models for analysis.
  • Applying phylogenetic comparative methods to infer evolutionary processes.

Main Results:

  • Ecological theories on community assembly and metacommunities are applicable to microbiome research.
  • Phylogenetic comparative methods effectively quantify evolutionary model fit.
  • Correlations between traits and evolutionary rates can be detected, inferring evolutionary processes.

Conclusions:

  • A dual framework (community and trait) provides a holistic view of host-microbiome interactions.
  • Integrating ecological and evolutionary approaches advances understanding of host evolution and microbial biodiversity.
  • Modern statistical and phylogenetic methods are powerful tools for microbiome research.