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In vivo Positron Emission Tomography to Reveal Activity Patterns Induced by Deep Brain Stimulation in Rats
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Direct attenuation correction of brain PET images using only emission data via a deep convolutional encoder-decoder

Isaac Shiri1, Pardis Ghafarian2,3, Parham Geramifar4

  • 1Research Center for Molecular and Cellular Imaging, Tehran University of Medical Sciences, Tehran, Iran.

European Radiology
|June 23, 2019
PubMed
Summary

This study introduces a deep learning method for direct attenuation correction (AC) of PET images, bypassing the need for anatomical data. The technique shows promise for improving brain PET imaging quality and applications.

Keywords:
Artificial intelligenceBrain imagingDeep learningPositron emission tomographyRadiomics

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Area of Science:

  • Medical Imaging
  • Artificial Intelligence
  • Nuclear Medicine

Background:

  • Attenuation correction (AC) is crucial for accurate PET image quantification.
  • Traditional AC methods often rely on separate transmission scans or anatomical information, which can be challenging in certain settings like PET/MRI.

Purpose of the Study:

  • To develop and evaluate a deep learning-based method for direct, emission-based attenuation correction of PET images.
  • To assess the performance of the proposed method using quantitative metrics and radiomic feature analysis.

Main Methods:

  • A convolutional encoder-decoder network was designed to generate attenuation-corrected (AC) PET images directly from non-attenuation-corrected (NAC) images.
  • The network was trained and validated on brain PET data from 129 patients.
  • Image quality was assessed using Peak Signal-to-Noise Ratio (PSNR) and Structural Similarity Index Metric (SSIM).
  • Radiomic features from 83 brain regions were analyzed to evaluate quantification accuracy and reliability.

Main Results:

  • The deep learning model achieved high image quality metrics (PSNR: 39.2 ± 3.65, SSIM: 0.989 ± 0.006) on the external validation set.
  • Mean relative error (RE) for SUVmean across all regions was minimal (-0.10 ± 2.14%), with only 3 regions showing significant differences.
  • SUVmax analysis showed a mean RE of -3.87 ± 2.84%, with 17 regions exhibiting significant differences.

Conclusions:

  • Direct emission-based attenuation correction of PET images using deep convolutional encoder-decoder networks is a viable and promising technique.
  • The method demonstrates robustness, particularly for SUVmean quantification, and has potential applications in PET/MRI and dedicated brain PET scanners.
  • This deep learning approach offers a novel way to perform AC without anatomical information, enhancing PET imaging capabilities.