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Dimensionality reduction of diffusion MRI measures for improved tractometry of the human brain
Maxime Chamberland1, Erika P Raven1, Sila Genc2
1Cardiff University Brain Research Imaging Centre (CUBRIC), School of Psychology, Cardiff University, Cardiff, UK.
Abstract:
Various diffusion MRI (dMRI) measures have been proposed for characterising tissue microstructure over the last 15 years. Despite the growing number of experiments using different dMRI measures in assessments of white matter, there has been limited work on: 1) examining their covariance along specific pathways; and on 2) combining these different measures to study tissue microstructure. Indeed, it quickly becomes intractable for existing analysis pipelines to process multiple measurements at each voxel and at each vertex forming a streamline, highlighting the need for new ways to visualise or analyse such high-dimensional data. In a sample of 36 typically developing children aged 8-18 years, we profiled various commonly used dMRI measures across 22 brain pathways. Using a data-reduction approach, we identified two biologically-interpretable components that capture 80% of the variance in these dMRI measures. The first derived component captures properties related to hindrance and restriction in tissue microstructure, while the second component reflects characteristics related to tissue complexity and orientational dispersion. We then demonstrate that the components generated by this approach preserve the biological relevance of the original measurements by showing age-related effects across developmentally sensitive pathways. In summary, our findings demonstrate that dMRI analyses can benefit from dimensionality reduction techniques, to help disentangling the neurobiological underpinnings of white matter organisation.
Insights
Dimensionality reduction in diffusion MRI (dMRI) simplifies complex data. This study identifies two key components representing tissue microstructure, aiding the analysis of white matter organization in children.
Area of Science:
- Neuroimaging
- Biomedical Engineering
- Developmental Neuroscience
Background:
- Diffusion MRI (dMRI) measures are crucial for characterizing white matter microstructure.
- Existing analyses struggle with combining multiple dMRI measures due to high-dimensional data.
- There's a need for advanced methods to analyze complex dMRI data across brain pathways.
Purpose of the Study:
- To develop and validate a data-reduction approach for analyzing multiple dMRI measures simultaneously.
- To identify interpretable biological components from dMRI data.
- To investigate age-related changes in white matter microstructure using the reduced components.
Main Methods:
- Collected dMRI data from 36 typically developing children (aged 8-18 years).
- Applied a data-reduction technique to profile various dMRI measures across 22 brain pathways.
- Identified two principal components capturing 80% of the variance in dMRI measures.
Main Results:
- The first component reflects tissue hindrance and restriction.
- The second component captures tissue complexity and orientational dispersion.
- These components revealed significant age-related effects in developmentally sensitive pathways.
Conclusions:
- Dimensionality reduction offers a powerful approach for analyzing high-dimensional dMRI data.
- The identified components provide biologically relevant insights into white matter microstructure.
- This method can help disentangle the neurobiological basis of white matter organization and development.
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