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Updated: Jan 23, 2026

Detection of Targetable Alterations in Non-small Cell Lung Cancer using Next-generation Sequencing
Published on: October 10, 2025
A new small cell lung cancer biomarker identified by Cell-SELEX generated aptamers
Wei Zhou1, Libo Zhao2, Hongyu Yuan3
1Beijing National Research Center for Molecular Sciences, Key Laboratory of Molecular Nanostructure and Nanotechnology, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, PR China; University of Chinese Academy of Sciences, Beijing, 100049, PR China.
Abstract:
Small cell lung cancer (SCLC) has been a recalcitrant cancer without significant breakthroughs in clinical treatment during the past three decades. As there is a lack of effective protein inhibitor for SCLC targeted therapy, the discovery of new druggable SCLC biomarkers is a pressing work. Here we identified a new protein biomarker of SCLC, which is high density lipoprotein binding protein (HDLBP), through the aptamer generated by cell-SELEX against SCLC cells. Immunohistochemistry results showed an elevated HDLBP level in SCLC tissues from clinical samples. Attenuating HDLBP expression with siRNA inhibited proliferation and metastasis of SCLC cells in vitro and tumor formation in vivo. Mechanism study revealed the new function of HDLBP in promoting G1/S cell cycle transition for tumor progression. While the inhibitor of HDLBP has been reported, our work suggested a promising potential of targeting HDLBP to improve the treatment of fatal SCLC and a powerful tool of using cell-SELEX in cancer medicine.
Insights
Researchers identified high-density lipoprotein binding protein (HDLBP) as a novel biomarker for small cell lung cancer (SCLC). Targeting HDLBP shows promise for improving SCLC treatment and demonstrates the utility of cell-SELEX in cancer research.
Area of Science:
- Oncology
- Biochemistry
- Molecular Biology
Background:
- Small cell lung cancer (SCLC) remains a challenging malignancy with limited therapeutic advancements over the last 30 years.
- The absence of effective targeted therapies necessitates the identification of new druggable biomarkers for SCLC.
- Developing novel therapeutic strategies is critical for improving outcomes in SCLC patients.
Purpose of the Study:
- To identify and validate novel protein biomarkers for small cell lung cancer.
- To investigate the functional role of identified biomarkers in SCLC progression.
- To explore the therapeutic potential of targeting novel biomarkers in SCLC.
Main Methods:
- Cell-based systematic evolution of ligands by exponential enrichment (cell-SELEX) was employed to generate aptamers against SCLC cells.
- Immunohistochemistry was used to assess biomarker expression in clinical SCLC tissue samples.
- Small interfering RNA (siRNA) was utilized to attenuate biomarker expression, and proliferation, metastasis, and tumor formation assays were performed in vitro and in vivo.
Main Results:
- High-density lipoprotein binding protein (HDLBP) was identified as a novel SCLC biomarker.
- Elevated HDLBP levels were observed in clinical SCLC tissues.
- Inhibition of HDLBP suppressed SCLC cell proliferation, metastasis, and tumor growth, revealing its role in promoting G1/S cell cycle transition.
Conclusions:
- HDLBP is a promising therapeutic target for improving small cell lung cancer treatment.
- Targeting HDLBP offers a potential new strategy for SCLC therapy.
- Cell-SELEX is a powerful tool for biomarker discovery in cancer medicine.
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