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Updated: Jan 22, 2026

Functional Assessment of BRCA1 variants using CRISPR-Mediated Base Editors
Published on: February 28, 2021
Chlorambucil targets BRCA1/2-deficient tumours and counteracts PARP inhibitor resistance
Eliana Mc Tacconi1, Sophie Badie1, Giuliana De Gregoriis1
1Genome Stability and Tumorigenesis Group, Department of Oncology, The CR-UK/MRC Oxford Institute for Radiation Oncology, University of Oxford, Oxford, UK.
Abstract:
Due to compromised homologous recombination (HR) repair, BRCA1- and BRCA2-mutated tumours accumulate DNA damage and genomic rearrangements conducive of tumour progression. To identify drugs that target specifically BRCA2-deficient cells, we screened a chemical library containing compounds in clinical use. The top hit was chlorambucil, a bifunctional alkylating agent used for the treatment of chronic lymphocytic leukaemia (CLL). We establish that chlorambucil is specifically toxic to BRCA1/2-deficient cells, including olaparib-resistant and cisplatin-resistant ones, suggesting the potential clinical use of chlorambucil against disease which has become resistant to these drugs. Additionally, chlorambucil eradicates BRCA2-deficient xenografts and inhibits growth of olaparib-resistant patient-derived tumour xenografts (PDTXs). We demonstrate that chlorambucil inflicts replication-associated DNA double-strand breaks (DSBs), similarly to cisplatin, and we identify ATR, FANCD2 and the SNM1A nuclease as determinants of sensitivity to both drugs. Importantly, chlorambucil is substantially less toxic to normal cells and tissues in vitro and in vivo relative to cisplatin. Because chlorambucil and cisplatin are equally effective inhibitors of BRCA2-compromised tumours, our results indicate that chlorambucil has a higher therapeutic index than cisplatin in targeting BRCA-deficient tumours.
Insights
Chlorambucil specifically targets BRCA1/2-deficient tumors, including resistant types, with less toxicity than cisplatin. This alkylating agent shows promise for treating BRCA-mutated cancers, offering a better therapeutic index.
Area of Science:
- Oncology
- Cancer Biology
- Genetics
Background:
- BRCA1/2 mutations impair homologous recombination (HR) DNA repair, leading to genomic instability in tumors.
- Targeting DNA repair deficiencies presents a therapeutic strategy for BRCA-mutated cancers.
Purpose of the Study:
- To identify clinically approved drugs that selectively kill BRCA2-deficient cancer cells.
- To evaluate chlorambucil as a potential therapeutic agent for BRCA-deficient and drug-resistant tumors.
Main Methods:
- Screened a library of clinical compounds for toxicity against BRCA2-deficient cells.
- Assessed chlorambucil's efficacy and toxicity in vitro and in vivo using cell lines and xenografts.
- Investigated mechanisms of sensitivity and resistance involving DNA repair pathways.
Main Results:
- Chlorambucil was identified as a potent agent against BRCA1/2-deficient cells, including those resistant to olaparib and cisplatin.
- Chlorambucil eradicated BRCA2-deficient xenografts and inhibited resistant tumor growth.
- Chlorambucil induces replication-associated DNA double-strand breaks and demonstrates a higher therapeutic index than cisplatin in BRCA-deficient models.
Conclusions:
- Chlorambucil is a promising drug for treating BRCA-deficient tumors, including those resistant to PARP inhibitors and platinum-based chemotherapy.
- Chlorambucil offers a superior therapeutic index compared to cisplatin for targeting BRCA-mutated cancers.
- ATR, FANCD2, and SNM1A are key determinants of sensitivity to chlorambucil and cisplatin in BRCA-deficient contexts.
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