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Applying Advanced In Vitro Culturing Technology to Study the Human Gut Microbiota
Published on: February 15, 2019
Bifidobacterium and Lactobacillus Composition at Species Level and Gut Microbiota Diversity in Infants before 6 Weeks
Bo Yang1,2,3, Yingqi Chen1,2, Catherine Stanton3,4,5
1State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi 214122, China.
Insights
Infant gut microbiota composition significantly differs based on delivery and feeding methods. Standard vaginal delivery and breastfeeding promote higher abundance and diversity of beneficial bacteria like Bifidobacterium.
Area of Science:
- Microbiology
- Infant Health
- Gut Microbiome Research
Background:
- The gut microbiota plays a crucial role in infant development and health.
- Delivery mode (vaginal vs. Cesarean section) and feeding practices (breastfeeding vs. formula feeding) are known to influence infant gut microbial colonization.
Purpose of the Study:
- To investigate the impact of different delivery and feeding modes on the gut microbiota composition of early infants.
- To specifically analyze the abundance and diversity of Bifidobacterium and Lactobacillus species.
Main Methods:
- Sequencing of 16S rRNA V3-V4 regions and specific bifidobacterial and lactobacilli groEL genes from infant fecal samples using Illumina MiSeq.
- Comparative analysis of gut microbiota composition across different delivery (standard vaginal delivery [SVD] vs. Cesarean section [CS]) and feeding groups (breast-fed [BF], milk-powder-fed [MPF], mixed-fed [MF]).
Main Results:
- Gut microbiota abundance was significantly higher in SVD and BF groups compared to CS, MPF, and MF groups.
- Unclassified Enterobacteriaceae was dominant, followed by Bifidobacterium, which was highly abundant in SVD and BF groups.
- Dominant Bifidobacterium species included B. longum subsp. longum, B. longum subsp. infantis, and B. animalis subsp. lactis. B. dentium and Bifidobacterium diversity were higher in SVD and BF groups.
- Lactobacillus species L. rhamnosus and L. gasseri were dominant; however, Lactobacillus diversity was higher in CS and MPF groups.
- Functional predictions indicated significant differences in pathways like the phosphotransferase system and taurine and hypotaurine metabolism between groups.
Conclusions:
- Delivery mode and feeding methods significantly shape the gut microbiota composition in early infants.
- These differences, particularly in Bifidobacterium and Lactobacillus communities, have substantial implications for infant physiological functions.
- The study highlights the importance of considering delivery and feeding practices for infant gut health and development.
Abstract:
Our objective was to investigate the effects of different delivery and feeding modes on the gut microbiota composition of early infants with special emphasis on Bifidobacterium and Lactobacillus profiles at species level. 16S rRNA V3-V4 regions, bifidobacterial, and lactobacilli groEL genes from infant feces were sequenced by Illumina MiSeq. Gut microbiota abundance was significantly different, where standard vaginally delivered (SVD) and breast-fed (BF) groups were higher in comparison with caesarean section (CS), milk-powder-fed (MPF), and mixed-fed (MF) groups. The genus unclassified Enterobacteriaceae was dominant, followed by Bifidobacterium, which was highly abundant in SVD and BF groups. The dominant Bifidobacterium species in all groups were B. longum subsp. longum, B. longum subsp. infantis and B. animalis subsp. lactis. B. dentium and the diversity of Bifidobacterium in SVD and BF groups were significantly higher. For Lactobacillus profiles, L. rhamnosus and L. gasseri were dominant among all the groups, while Lactobacillus species in CS and MPF groups were more diverse. Functional predictions showed significant differences between delivery mode and feeding groups, such as phosphotransferase system as well as taurine and hypotaurine metabolism. In early infants with different delivery and feeding methods, gut microbiota-particularly bifidobacteria and lactobacilli communities-showed significant differences, with strong implications for physiological functions.
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