Related Experiment Video
Updated: Jan 22, 2026

Population and Single-Cell Analysis of Antibiotic Persistence in Escherichia coli
Published on: March 24, 2023
Ampicillin-treated Lactococcus lactis MG1363 populations contain persisters as well as viable but non-culturable
Rinke J van Tatenhove-Pel1,2, Emile Zwering1, Ana Solopova3
1Systems Bioinformatics, Amsterdam Institute for Molecules, Medicines and Systems, VU University Amsterdam, de Boelelaan 1108, 1081 HV, Amsterdam, The Netherlands.
Abstract:
Lactococcus lactis is used as cell-factory and strain selections are regularly performed to improve production processes. When selection regimes only allow desired phenotypes to survive, for instance by using antibiotics to select for cells that do not grow in a specific condition, the presence of more resistant subpopulations with a wildtype genotype severely slows down the procedure. While the food grade organism L. lactis is not often exposed to antibiotics we characterized its response to ampicillin in more detail, to better understand emerging population heterogeneity and how this might affect strain selection procedures. Using growth-dependent viability assays we identified persister subpopulations in stationary and exponential phase. Growth-independent viability assays revealed a 100 times larger subpopulation that did not grow on plates or in liquid medium, but had an intact membrane and could maintain a pH gradient. Over one third of these cells restored their intracellular pH when we induced a temporary collapse, indicating that this subpopulation was metabolically active and in a viable but non-culturable state. Exposure of L. lactis MG1363 to ampicillin therefore results in a heterogeneous population response with different dormancy states. These dormant cells should be considered in survival-based strain selection procedures.
Insights
Lactococcus lactis exposed to ampicillin exhibits population heterogeneity, including dormant, viable but non-culturable cells. These subpopulations impact strain selection processes.
Area of Science:
- Microbiology
- Industrial Biotechnology
- Cell Biology
Background:
- Lactococcus lactis is a key cell-factory in industrial processes.
- Strain selection is crucial for optimizing production but can be hindered by resistant subpopulations.
- Understanding population heterogeneity is vital for effective strain development.
Purpose of the Study:
- To characterize the response of Lactococcus lactis to ampicillin.
- To investigate population heterogeneity and dormancy states in L. lactis.
- To assess the impact of these dormant cells on strain selection procedures.
Main Methods:
- Growth-dependent and growth-independent viability assays were employed.
- Characterization of non-culturable subpopulations using membrane integrity and pH gradient maintenance.
- Assessment of metabolic activity in dormant cells via induced pH collapse recovery.
Main Results:
- Persister subpopulations were identified in both stationary and exponential phases.
- A large subpopulation (100x) of viable but non-culturable (VBNC) cells was detected.
- Over one-third of VBNC cells demonstrated metabolic activity, indicated by pH restoration.
Conclusions:
- Ampicillin exposure induces diverse dormancy states in L. lactis populations.
- Dormant and VBNC cells represent a significant portion of the population.
- These dormant cells must be accounted for in survival-based strain selection protocols.
Related Concept Videos
Conservation of Small Populations
What is Population Genetics?
Population Growth
What are Populations and Communities?
Cell Culture
Conservation of Declining Populations

