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Updated: Jan 22, 2026

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
Genetic variants identified by target next-generation sequencing in heart transplant patients with dilated
Elisabete Martins1, Alexandra Sousa2, Paulo Canedo3
1Department of Medicine, Faculty of Medicine, University of Porto, Portugal; Institute for Innovation and Health Research (I3S), Porto, Portugal; Department of Cardiology, Centro Hospitalar Universitário de São João, E.P.E., Porto, Portugal.
Insights
Genetic testing in end-stage dilated cardiomyopathy (DCM) patients undergoing heart transplantation identified new variants, particularly in the LMNA gene. This highlights the utility of next-generation sequencing (NGS) for genetic characterization in advanced DCM.
Area of Science:
- Cardiology
- Genetics
- Molecular Biology
Background:
- Dilated cardiomyopathy (DCM) is a severe heart muscle disease.
- End-stage DCM often necessitates heart transplantation.
- Understanding genetic underpinnings is crucial for DCM management.
Purpose of the Study:
- To identify genetic variants in adult patients with end-stage DCM undergoing heart transplantation.
- To contribute to the knowledge of genetic factors in DCM.
- To evaluate the role of target next-generation sequencing (NGS) in this patient cohort.
Main Methods:
- Targeted next-generation sequencing (NGS) was employed.
- Fifteen preselected genes known for DCM associations were screened.
- Genetic variants were analyzed in 13 unrelated adult patients with end-stage DCM.
Main Results:
- Nine genetic variants were identified in six (46%) patients.
- Mutations were found in LMNA, LBD3, TNNT2, and TCAP genes.
- Most identified variants were novel and classified as of uncertain significance; some patients had multiple variants.
Conclusions:
- NGS is a valuable tool for the genetic characterization of DCM patients.
- The LMNA gene is frequently implicated in DCM and should be routinely assessed.
- Further research is needed to clarify the significance of identified variants.
Introduction And Objectives:
Dilated cardiomyopathy (DCM) is a myocardial disease that can progress to a terminal stage, requiring heart transplantation. In this work we aim to contribute to knowledge of genetic variants in adult patients undergoing heart transplantation due to end-stage DCM, reporting the results obtained in our single-center tertiary hospital series using target next-generation sequencing (NGS).
Methods And Results:
Genetic variants were screened in 15 genes, preselected based on variants previously identified in DCM patients. Thirteen unrelated patients were included, nine (69%) male, mean age at diagnosis 33±13 years, eight (62%) with familial DCM. Nine genetic variants were identified in six (46%) patients: five in LMNA, two in LBD3, one in TNNT2 and one in TCAP. These variants were new in most patients. The majority were classified as of uncertain significance. Two patients were double and triple heterozygotes in the LBD3 and LMNA genes, respectively.
Conclusion:
Our results highlight the potential of NGS in the genetic characterization of DCM patients. LMNA is one of the most frequently mutated genes and should be included in all target gene assessments of end-stage DCM patients until more data are available.
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