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Updated: Jan 22, 2026

Identification of Cyclin-dependent Kinase 1 Specific Phosphorylation Sites by an In Vitro Kinase Assay
Published on: May 3, 2018
Cyclic AMP-Dependent Protein Kinase Phosphorylates TDP-43 and Modulates Its Function in Tau mRNA Processing
Jianlan Gu1,2,3, Dandan Chu1, Nana Jin1
1Key Laboratory of Neuroregeneration of Jiangsu and Ministry of Education, Co-innovation Center of Neuroregeneration, Nantong University, Nantong, Jiangsu, China.
Cyclic AMP-dependent protein kinase (PKA) phosphorylates trans-active response DNA-binding protein of 43 kDa (TDP-43), regulating its function in tau mRNA processing. PKA activation may mitigate TDP-43-related pathology in Alzheimer's disease.
Area of Science:
- Neuroscience
- Molecular Biology
- Biochemistry
Background:
- Trans-active response DNA-binding protein of 43 kDa (TDP-43) is a nuclear protein involved in mRNA processing.
- TDP-43 regulates tau mRNA instability and exon 10 inclusion, processes implicated in neurodegenerative diseases.
- TDP-43 phosphorylation affects its function and aggregation, suggesting a regulatory role for kinases.
Purpose of the Study:
- To investigate the role of cyclic AMP-dependent protein kinase (PKA) in the phosphorylation and function of TDP-43.
- To determine the specific sites of TDP-43 phosphorylation by PKA.
- To assess the impact of PKA-mediated phosphorylation on TDP-43's role in tau mRNA processing.
Main Methods:
- Co-immunoprecipitation and co-localization assays to study TDP-43 and PKA interaction in the nucleus.
- In vitro and cell-based assays to identify and confirm phosphorylation sites on TDP-43 by PKA.
- Functional assays measuring tau mRNA instability and exon 10 inclusion in response to PKA overexpression.
Main Results:
- TDP-43 was found to co-immunoprecipitate with and co-localize to the nucleus with PKA.
- PKA directly phosphorylated TDP-43 at specific serine residues (Ser379, Ser403/404, Ser409/410).
- Phosphorylation by PKA enhanced further phosphorylation of TDP-43 at these sites.
- Overexpression of PKA reduced TDP-43's promotion of tau mRNA instability and exon 10 inclusion.
Conclusions:
- PKA directly phosphorylates TDP-43 at multiple sites, influencing its function.
- PKA-mediated phosphorylation of TDP-43 modulates its role in tau mRNA processing.
- These findings suggest that PKA signaling may be a therapeutic target for TDP-43-related pathologies, particularly in Alzheimer's disease (AD).
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