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Phasing quality assessment in a brown layer population through family- and population-based software

N Frioni1, D Cavero2, H Simianer3

  • 1Animal Breeding and Genetics Group, Department of Animal Sciences, Center for Integrated Breeding Research, University of Goettingen, Göttingen, Germany. nicolas.frioni-garcia@uni-goettingen.de.

BMC Genetics
|July 18, 2019
PubMed
Summary

High-quality haplotype phasing in poultry is crucial for genomic selection. Beagle v4.1 and FImpute with pedigree data offer the best accuracy when at least one parent is genotyped.

Keywords:
BeagleFImputeHaplotype phasingPhasing qualityPhasing softwarePoultry data

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