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Neuronal vulnerability and multilineage diversity in multiple sclerosis.

Lucas Schirmer1,2,3,4, Dmitry Velmeshev1,5, Staffan Holmqvist2

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Multiple sclerosis (MS) damages specific upper-cortical neurons and activates glial cells. This study reveals cellular changes in MS lesions, highlighting neuron vulnerability and glial responses.

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Area of Science:

  • Neuroscience
  • Immunology
  • Genomics

Background:

  • Multiple sclerosis (MS) is a chronic neuroinflammatory disease characterized by relapsing-remission, distinct lesion pathology in grey and white matter, and progressive neurodegeneration.
  • Understanding cellular and molecular changes within MS lesions is crucial for elucidating disease mechanisms and identifying therapeutic targets.

Purpose of the Study:

  • To investigate cell-type-specific transcriptomic alterations in multiple sclerosis lesions.
  • To identify vulnerable neuronal populations and glial activation patterns in the central nervous system during MS.

Main Methods:

  • Single-nucleus RNA sequencing (snRNA-seq) was employed to profile gene expression changes across various cell lineages within MS lesions.
  • Multiplex in situ hybridization was used for validation of key findings.
  • Functional assays in mouse and human cell cultures confirmed microglial phagocytosis of myelin transcripts.

Main Results:

  • Selective vulnerability and loss of CUX2-expressing excitatory projection neurons in upper-cortical layers were observed, associated with upregulation of stress-response genes and long non-coding RNAs.
  • Signatures of stressed oligodendrocytes, reactive astrocytes, and activated microglia were predominantly found at the lesion rims.
  • snRNA-seq identified phagocytosing microglia/macrophages ingesting myelin transcripts, further validated by functional assays.

Conclusions:

  • MS lesions exhibit lineage- and region-specific transcriptomic changes, with distinct cortical neuron damage and glial activation patterns.
  • Cortical neuron vulnerability and glial responses contribute to the progression of multiple sclerosis lesions.