Related Experiment Video
Updated: Jan 22, 2026

ATAC-Seq Optimization for Cancer Epigenetics Research
Published on: June 30, 2022
Key actors in cancer therapy: epigenetic modifiers
Remzi Okan Akar1, Selin Selvi1, Engin Ulukaya2
1Department of Cancer Biology and Pharmacology, Institute of Health Sciences, İstinye University, İstanbul, Turkey.
Abstract:
Epigenetic reprogramming plays a crucial role in the tumorigenicity and maintenance of tumor-specific gene expression that especially occurs through DNA methylation and/or histone modifications. It has well-defined mechanisms. It is known that alterations in the DNA methylation pattern and/or the loss of specific histone acetylation/methylation markers are related to several hallmarks of cancer, such as drug resistance, stemness, epithelial-mesenchymal transition, and metastasis. It has also recently been highlighted that epigenetic alterations are critical for the regulation of the stemlike properties of cancer cells (tumor-initiating cells; cancer stem cells). Cancer stem cells are thought to be responsible for the recurrence of cancer which makes the patient return to the clinic with metastatic tumor tissue. Hence, the dysregulation of epigenetic machinery represents potential new therapeutic targets. Therefore, compounds with epigenetic activities have become crucial for developing new therapy regimens (e.g., antimetastatic agents) in the fight against cancer. Here, we review the epigenetic modifiers that have already been used in the clinic and/or in clinical trials, related preclinical studies in cancer therapy, and the smart combination strategies that target cancer stem cells along with the other cancer cells. The emerging role of epitranscriptome (RNA epigenetic) in cancer therapy has also been included in this review as a new avenue and potential target for the better management of cancer-beneficial epigenetic machinery.
Insights
Epigenetic reprogramming influences cancer development and recurrence by altering gene expression. Targeting epigenetic modifiers offers new therapeutic strategies, including combinations, to combat cancer stem cells and metastasis.
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- Epigenetic reprogramming, through DNA methylation and histone modifications, is fundamental to cancer biology.
- Aberrant epigenetic patterns are linked to cancer hallmarks like drug resistance, stemness, and metastasis.
- Epigenetic alterations critically regulate cancer stem cell properties, driving tumor recurrence and metastasis.
Purpose of the Study:
- To review epigenetic modifiers used in clinical and preclinical cancer therapy.
- To explore combination strategies targeting cancer stem cells and other cancer cells.
- To highlight the emerging role of epitranscriptomics in cancer treatment.
Main Methods:
- Literature review of epigenetic modifiers in cancer therapy.
- Analysis of clinical trials and preclinical studies.
- Discussion of combination strategies and epitranscriptomic targets.
Main Results:
- Epigenetic modifiers are established and emerging therapeutic targets in oncology.
- Combination therapies show promise for targeting diverse cancer cell populations.
- The epitranscriptome presents a novel frontier for cancer management.
Conclusions:
- Epigenetic dysregulation is a key driver of cancer, making epigenetic machinery a vital therapeutic target.
- Targeting cancer stem cells via epigenetic modifications is crucial for preventing recurrence and metastasis.
- The integration of epitranscriptomic insights may lead to more effective cancer therapies.
Related Concept Videos
Epigenetic Regulation
Epigenetic Regulation
X-chromosome...
Actor-Observer Effect
Cancer Therapies
However, cancer treatments can pose several challenges, as therapies used to kill cancer cells are generally also toxic to normal cells. Moreover, cancer cells mutate rapidly and can develop resistance to chemical agents or radiation therapy. Besides, all types of cancer cells may not respond to the same therapy. Some cancer cells respond to one...
Targeted Cancer Therapies
There are several types of targeted therapies against...
Key Techniques in Microbiology

