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Updated: Jan 22, 2026

Detection of Helicobacter pylori Infection and Antibiotic Resistance via Stool Quantitative Polymerase Chain Reaction Analysis
Published on: May 16, 2025
Potential transmission sources of Helicobacter pylori infection: detection of H. pylori in various environmental
Marzieh Farhadkhani1, Mahnaz Nikaeen2, Akbar Hassanzadeh3
11Student Research Committee, School of Health, Isfahan University of Medical Sciences, Isfahan, Iran.
Purpose:
Helicobacter pylori is one of the most common human infectious agents which may be transmitted via water. This study was designed to test H. pylori presence via molecular methods in various aquatic environments as well as sewage sludge (SS) to understand the role of these environments in the pathogen's transmission.
Methods:
specific primers for the 16S rRNA and ureA genes of H. pylori were used in a nested and semi-nested PCR, respectively. Detection sensitivity of H. pylori in environmental samples by semi-nested PCR was also compared with real-time PCR. Analysis of fecal coliforms (FC) as pollution indicator bacteria was also performed.
Results:
H. pylori 16S rRNA gene was detected in 36% (14/39) of wastewater samples and 8% (2/25) of water samples, while amplification of ureA gene yielded only two positive results. None of the SS samples were positive for H. pylori and real-time PCR could not identify H. pylori in any of the samples. The results showed no correlation between the presence of H. pylori and FC.
Conclusions:
Our result revealed the widespread presence of H. pylori in wastewater samples which indicates wastewater may be a source for dissemination and transmission of H. pylori infection. Further research is needed to determine the risk of H. pylori in wastewater reuse for irrigation of crops.
Insights
Helicobacter pylori was detected in wastewater, suggesting it may spread infection. Sewage sludge and water samples showed lower presence, and fecal coliforms did not correlate with H. pylori.
Area of Science:
- Environmental microbiology
- Molecular biology
- Public health
Background:
- Helicobacter pylori is a common human pathogen.
- Waterborne transmission of H. pylori is a potential public health concern.
- Understanding environmental reservoirs is crucial for controlling H. pylori infections.
Purpose of the Study:
- To investigate the presence of H. pylori in aquatic environments and sewage sludge using molecular methods.
- To assess the role of these environments in H. pylori transmission.
- To compare the sensitivity of different PCR techniques for H. pylori detection.
Main Methods:
- Nested and semi-nested PCR targeting H. pylori 16S rRNA and ureA genes.
- Comparison of semi-nested PCR with real-time PCR for H. pylori detection sensitivity.
- Fecal coliform analysis as an indicator of fecal pollution.
Main Results:
- H. pylori 16S rRNA gene detected in 36% of wastewater and 8% of water samples.
- UreA gene amplification yielded only two positive results.
- No H. pylori detected in sewage sludge; real-time PCR was not effective for environmental samples. No correlation found with fecal coliforms.
Conclusions:
- Wastewater serves as a significant reservoir for H. pylori dissemination.
- Further research is required to evaluate risks associated with wastewater reuse for crop irrigation.
- Molecular detection methods are essential for identifying H. pylori in environmental matrices.
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