Effect of the software binning and averaging data during microcomputed tomography image acquisition
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Updated: Jan 21, 2026

Cryo-Electron Tomography Remote Data Collection and Subtomogram Averaging
Published on: July 12, 2022
Simone Peixe Friedrichsdorf1, Victor Elias Arana-Chavez2, Paolo Maria Cattaneo3
1Department of Orthodontics and Pediatric Dentistry, School of Dentistry, University of São Paulo (USP), São Paulo, Brazil. simone.peixe@usp.br.
Abstract:
This study describes the effect of the software binning and data averaging during micro CT volume acquisition, on the assessment of root resorption volumes. The mesial roots (n = 9), after orthodontic tooth movement during 14 days, were scanned, using a micro CT system (9 µm/pixel). All roots were reconstructed and the volumes of the resorption lacunae evaluated. The height and width of the pixels vary according to the parameters (A1, A2, A3, A4, A5, A6, A7, A8, A9) used during the scan. In the root #1 the mean volumes of resorption were similar in A4 and A7; in the root #2 there was no similarity in the mean volumes of resorption in any of the parameters; in root #3 only A4 presented mean volume different from zero (3.05 × 10°). In the root #5, the A1 and A7 presented similar mean volumes and in the A6 and A9 presented near mean volumes. In the root #9 the A1, A4, and A7 presented similar mean volumes and A6 and A9 also had similar mean volumes. Significant difference was detected in the volume of resorption among the roots #2, #5 and #9 (p = 0.04). When analyzing delicate structures such as the roots of rats' molars, the variation of such parameters will significantly influence the results.
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