Related Experiment Video
Updated: Jan 21, 2026

Cryosectioning Yeast Communities for Examining Fluorescence Patterns
Published on: December 26, 2012
Culture-based identification to examine spatiotemporal patterns of fungal communities colonizing wood in ground
Paola Torres-Andrade1, Jeffrey J Morrell2, Jed Cappellazzi1
1Department of Wood Science & Engineering, Oregon State University , Corvallis , Oregon 97330.
Abstract:
Timber durability is often assessed using small wood stakes exposed in direct soil contact, and the assessment generally emphasizes effects on wood rather than organisms involved. Understanding fungal colonization patterns can help identify key decay agents under varying conditions and use these patterns to improve wood protection strategies. Fungal colonization of red alder (Alnus rubra), Douglas-fir (Pseudotsuga menziesii) heartwood/sapwood, and western redcedar (Thuja plicata) field stakes was assessed over 2 y in western Oregon. Spatiotemporal fungal community variations were identified via culturing and DNA sequencing, where 814 isolates were identified from 84 stakes. Forty-six ascomycete genera were identified, with Phialophora, Trichoderma, and Epicoccum species occurring most frequently. Twenty-three basidiomycete genera were identified, with Trametes and Phanerochaete being the most common. Douglas-fir and western redcedar stakes contained the highest and lowest diversity levels, respectively, reflecting natural durability differences of these species. Fungal species abundance was higher below ground than in the above ground and groundline zones, likely reflecting more stable moisture regimes, proximity to soil-based fungi, and potential nutrient migration into wood beneath the soil surface. Ascomycetes were proportionally more abundant early in the exposure period, but basidiomycetes were also observed early in the process, and there appeared to be no consistent colonization pattern.
Related Concept Videos
Community Based Intervention
Foundations of Community Mental Health Programs
Central to the success of community-based interventions is the...
What are Populations and Communities?
Transmission-based Precautions I: Contact, Enteric, and Droplets
Contact Precautions:
Contact precautions are the measures taken to prevent the transmission of infectious agents, especially epidemiologically important microorganisms such as MRSA or influenza, primarily transmitted through direct or indirect contact with an...
Wood Surfacing
The equipment used in the surfacing process is a plane equipped with rotating blades. This tool efficiently smoothens the wood surface and can...
Wood Fasteners
Nails are the most common fasteners, consisting of sharp-pointed metal pins that are driven into wood using a hammer or a mechanical nail gun. They come in a variety of diameters, heads, and lengths. Nailing techniques include...
Introduction to Wood
The structural integrity of the...

