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Updated: Jan 21, 2026

Assembly of Nucleosomal Arrays from Recombinant Core Histones and Nucleosome Positioning DNA
Published on: September 10, 2013
The histone methyltransferase Setd2 is indispensable for V(D)J recombination
Zhongzhong Ji1,2, Yaru Sheng1, Juju Miao1,2
1State Key Laboratory of Oncogenes and Related Genes, Renji-Med-X Clinical Stem Cell Research Center, and Department of Urology, Ren Ji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, 200127, China.
Setd2 deficiency blocks T and B cell development by impairing V(D)J recombination, a crucial process for generating diverse immune receptors. This histone methyltransferase is essential for lymphocyte development and is mutated in primary immunodeficiency.
Area of Science:
- Immunology
- Epigenetics
- Molecular Biology
Background:
- T cell receptors (TCR) and immunoglobulins are vital for adaptive immunity.
- Their diversity arises from V(D)J recombination during lymphocyte development.
- Epigenetic regulation of this process remains incompletely understood.
Purpose of the Study:
- To investigate the role of Setd2, a histone methyltransferase, in V(D)J recombination and lymphocyte development.
- To elucidate the epigenetic mechanisms governing V(D)J recombination.
Main Methods:
- Utilized a mouse model deficient in Setd2.
- Analyzed thymocyte and B cell development stages.
- Assessed histone modifications (H3K36me3) at TCR loci.
- Examined RAG1 binding and DNA double-strand break repair.
Main Results:
- Setd2 deficiency caused a severe developmental block in thymocytes (DN3 stage) and B cells (pro-B stage).
- Reduced H3K36me3 enrichment at the TCRβ locus in Setd2-deficient mice.
- Impaired TCRβ V(D)J rearrangement due to reduced RAG1 binding and DNA repair.
- Setd2 mutations were identified in patients with primary immunodeficiency.
Conclusions:
- Setd2 is essential for V(D)J recombination in both T and B lymphocytes.
- H3K36me3 modification by Setd2 is critical for V(D)J rearrangement and lymphocyte development.
- Setd2 dysfunction contributes to primary immunodeficiency.
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