Impact of TREM2 risk variants on brain region-specific immune activation and plaque microenvironment in Alzheimer's disease patient brain samples
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Updated: Aug 15, 2026

Quantitative 3D In Silico Modeling (q3DISM) of Cerebral Amyloid-beta Phagocytosis in Rodent Models of Alzheimer's Disease
Published on: December 26, 2016
Stefan Prokop1,2,3,4, Kelly R Miller5,6, Sergio R Labra5
1Department of Pathology and Laboratory Medicine, AD Center Core (ADCC), Center for Neurodegenerative Disease Research, University of Pennsylvania (PENN) School of Medicine, Philadelphia, PA, 19104, USA. sprokop@ufl.edu.
Abstract:
Identification of multiple immune-related genetic risk factors for sporadic AD (sAD) have put the immune system center stage in mechanisms underlying this disorder. Comprehensive analysis of microglia in different stages of AD in human brains revealed microglia activation to follow the progression of AD neuropathological changes and requiring the co-occurrence of beta-Amyloid (Aβ) and tau pathology. Carriers of AD-associated risk variants in TREM2 (Triggering receptor expressed on myeloid cells 2) showed a reduction of plaque-associated microglia and a substantial increase in dystrophic neurites and overall pathological tau compared with age and disease stage matched AD patients without TREM2 risk variants. These findings were substantiated by digital spatial profiling of the plaque microenvironment and targeted gene expression profiling on the NanoString nCounter system, which revealed striking brain region dependent differences in immune response patterns within individual cases. The demonstration of profound brain region and risk-variant specific differences in immune activation in human AD brains impacts the applicability of immune-therapeutic approaches for sAD and related neurodegenerative diseases.
Insights
Genetic risk factors highlight the immune system
Area of Science:
- Neuroimmunology
- Alzheimer's Disease Pathogenesis
- Genetics of Neurodegeneration
Background:
- Multiple immune-related genetic risk factors implicate the immune system in sporadic Alzheimer's Disease (sAD).
- Microglia activation in human AD brains correlates with neuropathological progression, requiring both beta-Amyloid (Aβ) and tau pathology.
- TREM2 (Triggering receptor expressed on myeloid cells 2) risk variants influence AD pathology and microglia behavior.
Purpose of the Study:
- To investigate the role of immune system dysregulation in Alzheimer's Disease.
- To analyze the impact of AD-associated genetic risk variants, specifically in TREM2, on microglial response and neuropathology.
- To explore brain region-specific immune activation patterns in human AD.
Main Methods:
- Comprehensive analysis of microglia in human AD brains across different disease stages.
- Digital spatial profiling of the plaque microenvironment.
- Targeted gene expression profiling using the NanoString nCounter system.
Main Results:
- Microglia activation follows AD neuropathological progression, contingent on Aβ and tau co-occurrence.
- TREM2 risk variant carriers exhibit reduced plaque-associated microglia but increased dystrophic neurites and pathological tau.
- Significant brain region-dependent differences in immune response patterns were observed within individual cases.
Conclusions:
- Immune activation in human AD brains is complex, showing profound brain region and risk-variant specific differences.
- These findings suggest that the heterogeneity of immune responses impacts the efficacy of immune-therapeutic strategies for sAD.
- Understanding these specific immune profiles is crucial for developing targeted treatments for Alzheimer's Disease and related neurodegenerative disorders.
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