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Updated: Jan 21, 2026

Basics of Multivariate Analysis in Neuroimaging Data
Published on: July 24, 2010
Comparison of Test Statistics of Nonnormal and Unbalanced Samples for Multivariate Analysis of Variance in terms of
Can Ateş1, Özlem Kaymaz2, H Emre Kale3
1Department of Biostatistics, Van Yüzüncü Yıl University, Van, Turkey.
Abstract:
In this study, we investigate how Wilks' lambda, Pillai's trace, Hotelling's trace, and Roy's largest root test statistics can be affected when the normal and homogeneous variance assumptions of the MANOVA method are violated. In other words, in these cases, the robustness of the tests is examined. For this purpose, a simulation study is conducted in different scenarios. In different variable numbers and different sample sizes, considering the group variances are homogeneous (σ 12 = σ 22 = ⋯ = σ ) and heterogeneous (increasing) (σ 12 < σ 22 < ⋯<σ ), random numbers are generated from Gamma(4-4-4; 0.5), Gamma(4-9-36; 0.5), Student's t(2), and Normal(0; 1) distributions. Furthermore, the number of observations in the groups being balanced and unbalanced is also taken into account. After 10000 repetitions, type-I error values are calculated for each test for α = 0.05. In the Gamma distribution, Pillai's trace test statistic gives more robust results in the case of homogeneous and heterogeneous variances for 2 variables, and in the case of 3 variables, Roy's largest root test statistic gives more robust results in balanced samples and Pillai's trace test statistic in unbalanced samples. In Student's t distribution, Pillai's trace test statistic gives more robust results in the case of homogeneous variance and Wilks' lambda test statistic in the case of heterogeneous variance. In the normal distribution, in the case of homogeneous variance for 2 variables, Roy's largest root test statistic gives relatively more robust results and Wilks' lambda test statistic for 3 variables. Also in the case of heterogeneous variance for 2 and 3 variables, Roy's largest root test statistic gives robust results in the normal distribution. The test statistics used with MANOVA are affected by the violation of homogeneity of covariance matrices and normality assumptions particularly from unbalanced number of observations.
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