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Resistance to TRK inhibition mediated by convergent MAPK pathway activation
Emiliano Cocco1,2, Alison M Schram3,4, Amanda Kulick5,6
1Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Abstract:
TRK fusions are found in a variety of cancer types, lead to oncogenic addiction, and strongly predict tumor-agnostic efficacy of TRK inhibition1-8. With the recent approval of the first selective TRK inhibitor, larotrectinib, for patients with any TRK-fusion-positive adult or pediatric solid tumor, to identify mechanisms of treatment failure after initial response has become of immediate therapeutic relevance. So far, the only known resistance mechanism is the acquisition of on-target TRK kinase domain mutations, which interfere with drug binding and can potentially be addressable through second-generation TRK inhibitors9-11. Here, we report off-target resistance in patients treated with TRK inhibitors and in patient-derived models, mediated by genomic alterations that converge to activate the mitogen-activated protein kinase (MAPK) pathway. MAPK pathway-directed targeted therapy, administered alone or in combination with TRK inhibition, re-established disease control. Experimental modeling further suggests that upfront dual inhibition of TRK and MEK may delay time to progression in cancer types prone to the genomic acquisition of MAPK pathway-activating alterations. Collectively, these data suggest that a subset of patients will develop off-target mechanisms of resistance to TRK inhibition with potential implications for clinical management and future clinical trial design.
Insights
New TRK inhibitor resistance mechanisms have been discovered. Off-target alterations activating the MAPK pathway can cause treatment failure, suggesting combination therapies may improve outcomes for TRK fusion cancers.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Tropomyosin receptor kinase (TRK) fusions drive various cancers and predict response to TRK inhibitors like larotrectinib.
- Identifying resistance mechanisms is crucial following the approval of TRK inhibitors for solid tumors.
Purpose of the Study:
- To investigate novel mechanisms of resistance to TRK inhibitors beyond known on-target mutations.
- To explore the role of the mitogen-activated protein kinase (MAPK) pathway in TRK inhibitor resistance.
Main Methods:
- Analysis of genomic alterations in patients and patient-derived models treated with TRK inhibitors.
- Assessment of MAPK pathway activation as a resistance mechanism.
- Evaluation of MAPK pathway-directed therapies, alone or in combination with TRK inhibitors.
Main Results:
- Identified off-target resistance mediated by genomic alterations activating the MAPK pathway.
- Demonstrated that MAPK pathway-targeted therapy, alone or combined with TRK inhibition, restored disease control.
- Experimental models suggest upfront dual TRK and MEK inhibition may delay progression in susceptible cancers.
Conclusions:
- Off-target resistance via MAPK pathway activation is a significant mechanism of failure for TRK inhibitors.
- Targeting the MAPK pathway offers a therapeutic strategy to overcome TRK inhibitor resistance.
- These findings have implications for clinical management and the design of future clinical trials for TRK fusion-positive cancers.
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