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Electron Microscope Tomography and Single-particle Reconstruction01:07

Electron Microscope Tomography and Single-particle Reconstruction

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Transmission electron microscopy (TEM) can be used to determine the 3D structure of biological samples with the help of techniques such as electron microscope tomography and single-particle reconstruction. While single-particle reconstruction can examine macromolecules and macromolecular complexes in vitro conditions only, tomography permits the study of cell components or small cells in vivo.
Electron Tomography
Electron tomography can be performed either in TEM or STEM (scanning transmission...
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Fischer Projections02:18

Fischer Projections

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Learning to draw Fischer projections of molecules and understanding their relevance plays a crucial role in the visual depiction of organic molecules. A Fischer projection is a two-dimensional projection on a planar surface to simplify the three-dimensional wedge–dash representation of molecules. This is especially helpful in the case of molecules with multiple chiral centers that can be difficult to draw. Here, all the bonds of interest are represented as horizontal or vertical lines. While...
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Accelerators01:17

Accelerators

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Accelerators in concrete serve as admixtures to speed up the hardening process, enabling the concrete to achieve early strength faster. Although accelerators do not necessarily impact the time it takes concrete to set, they reduce this time in practice. A common accelerator is calcium chloride, which is particularly useful for hastening early strength development in cold weather or for rapid repair jobs that require quick heat generation after mixing.
The effectiveness of calcium chloride can...
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Newman Projections02:06

Newman Projections

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Different notations are used to represent the three-dimensional structure of molecules on two-dimensional surfaces. One of the most commonly used representations is the dash-wedge formula. The dashed wedges, solid wedges, and the plane lines indicate the groups situated behind the plane, coming out of the plane, and in the plane, respectively.
The organic molecules rotate across the single bonds leading to numerous temporary three-dimensional structures of varying energy known as...
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Econometric Views (EViews)01:29

Econometric Views (EViews)

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Econometric Views, often stylized as EViews, is a package that merges statistical analysis with econometric studies. It is designed to provide tools for time series analysis, forecasting, and econometric model simulation. The software originated from MicroTSP software and has evolved significantly since its inception in 1981. The history of EViews is marked by a continuous effort to enhance its computational speed and user interface. It was initially developed for large computing systems but...
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Accelerating Fluids01:17

Accelerating Fluids

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When a fluid is in constant acceleration, the pressure and buoyant force equations are modified. Suppose a beaker is placed in an elevator accelerating upward with a constant acceleration, a. In the beaker, assume there is a thin cylinder of height h with an infinitesimal cross-sectional area, ΔS.
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Related Experiment Video

Updated: Jan 20, 2026

Born Normalization for Fluorescence Optical Projection Tomography for Whole Heart Imaging
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Born Normalization for Fluorescence Optical Projection Tomography for Whole Heart Imaging

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Accelerated Stimulated Raman Projection Tomography by Sparse Reconstruction From Sparse-View Data.

Xueli Chen, Shouping Zhu, Huiyuan Wang

    IEEE Transactions on Bio-Medical Engineering
    |August 20, 2019
    PubMed
    Summary

    This study introduces a faster method for stimulated Raman projection tomography (SRPT) using fewer images. The new technique significantly reduces imaging time for 3D chemical analysis, enabling better studies of live systems.

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    Implementation of a Nonlinear Microscope Based on Stimulated Raman Scattering
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    Area of Science:

    • Chemical imaging
    • Biomedical optics
    • Image reconstruction

    Background:

    • Stimulated Raman projection tomography (SRPT) is a label-free technique for 3D chemical imaging.
    • Current SRPT reconstruction using filtered back projection (FBP) requires many projections, leading to long acquisition times.
    • This limitation hinders longitudinal studies of dynamic biological systems.

    Purpose of the Study:

    • To develop a sparse-view reconstruction scheme for SRPT to accelerate image acquisition.
    • To improve the speed of SRPT for live system imaging without compromising image quality.

    Main Methods:

    • Implemented a sparse reconstruction scheme using limited, sparsely sampled projections.
    • Employed simultaneous algebraic reconstruction technique (SART) with total variation regularization for iterative reconstruction.
    • Developed and compared a pixel vertex driven model (PVDM) with a distance driven model (DDM) for projection simulation.

    Main Results:

    • The PVDM showed superior performance over DDM with sparse-view data in simulations.
    • Reconstructed image quality was maintained even with as few as 15 projections.
    • Experimental validation in adipose cells demonstrated a 9-12 fold increase in imaging speed compared to FBP-based SRPT.

    Conclusions:

    • The proposed sparse reconstruction scheme significantly reduces SRPT acquisition time by an order of magnitude.
    • This acceleration enhances the potential of SRPT for in vivo and longitudinal imaging applications.