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Updated: Jan 20, 2026

Conventional BODIPY Conjugates for Live-Cell Super-Resolution Microscopy and Single-Molecule Tracking
Published on: June 8, 2020
Sensing Temperature in Vitro and in Cells Using a BODIPY Molecular Probe
Meredith M Ogle, Ashleigh D Smith McWilliams, Matthew J Ware1
1Department of Surgery , Baylor College of Medicine , Houston , Texas 77030 , United States.
A new polyethylene glycol-modified Boron dipyrromethene (PEG-BODIPY) dye acts as a sensitive thermometer for live cell imaging. This molecular rotor enables precise temperature monitoring within cells using fluorescence lifetime imaging microscopy (FLIM).
Area of Science:
- Chemical Biology
- Biomedical Engineering
- Materials Science
Background:
- Boron dipyrromethene (BODIPY) dyes are known molecular rotors sensitive to environmental factors like viscosity, polarity, and temperature.
- Developing precise and non-invasive methods for monitoring cellular temperature is crucial for understanding biological processes and disease states.
Purpose of the Study:
- To develop and characterize a novel polyethylene glycol-modified BODIPY (PEG-BODIPY) dye for accurate temperature sensing in vitro and in live cells.
- To investigate the dye's response to temperature and viscosity changes, and its utility in fluorescence lifetime imaging microscopy (FLIM).
Main Methods:
- Synthesis and characterization of a 1,3,5,7-tetramethyl-8-phenyl-BODIPY derivative functionalized with a polyethylene glycol (PEG) chain.
- Measurement of fluorescence lifetime changes in response to varying temperatures and viscosities.
- Live cell imaging experiments using PEG-BODIPY to assess cellular uptake, localization, toxicity, and temperature mapping via FLIM.
Main Results:
- The PEG-BODIPY dye exhibits temperature-dependent changes in fluorescence lifetime, primarily due to increased nonradiative decay at higher temperatures.
- The dye's fluorescence lifetime shows distinct dependencies on temperature and viscosity, enabling selective temperature monitoring at high viscosity.
- PEG-BODIPY efficiently stains live cells (excluding the nucleus) without significant toxicity, even at high concentrations (100 μM).
- FLIM successfully visualized intracellular temperature variations with sub-degree resolution.
Conclusions:
- The developed PEG-BODIPY molecular rotor is a promising tool for quantitative, non-invasive temperature mapping in biological systems.
- This probe facilitates real-time monitoring of cellular thermal dynamics, offering insights into heat dissipation mechanisms.
- PEG-BODIPY holds potential for applications in studying thermal effects of medical treatments like radiofrequency ablation and photodynamic therapy.
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