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Published on: March 19, 2019
Molecular Diagnostics in the Times of Surveillance for Candida auris
Milena Kordalewska1, David S Perlin2
1Center for Discovery and Innovation, Hackensack Meridian Health, Nutley, NJ 07110, USA. milena.kordalewska@hmh-cdi.org.
Abstract:
Recently, global health professionals have been significantly challenged by the emergence of Candida auris and its propensity to colonize human skin, persist in the healthcare environment, and cause healthcare-associated outbreaks. Additionally, C. auris isolates are often characterized by elevated minimal inhibitory concentration (MIC) values for antifungal drugs. Thus, rapid detection and accurate identification of C. auris together with an assessment of potential antifungal drug resistance has become essential for effective patient management, and infection prevention and control in healthcare facilities. Surprisingly, almost all of the commonly available diagnostic tools rely on recovery (growth) of yeast colonies from collected samples, which delays the diagnostic result by several days or longer. To circumvent these issues, molecular-based DNA amplification assays have been developed to identify C. auris DNA directly from patient samples. Moreover, allele discriminating detection probes can be used to rapidly assess validated mechanisms of echinocandin and azole resistance.
Insights
Rapid molecular assays are crucial for identifying the challenging fungus Candida auris and its antifungal resistance. This helps in effective patient management and infection control in healthcare settings.
Area of Science:
- Medical Mycology
- Infectious Diseases
- Clinical Diagnostics
Background:
- Candida auris poses a significant global health threat due to its colonization, persistence in healthcare environments, and association with outbreaks.
- C. auris infections are often linked to high minimal inhibitory concentration (MIC) values for antifungal drugs, complicating treatment.
- Current diagnostic methods relying on yeast culture are time-consuming, delaying critical patient management and infection control measures.
Purpose of the Study:
- To highlight the need for rapid detection and identification of Candida auris.
- To emphasize the importance of assessing antifungal drug resistance in C. auris isolates.
- To introduce molecular-based diagnostic approaches for timely identification and resistance assessment.
Main Methods:
- Development of molecular-based DNA amplification assays for direct detection of C. auris DNA from patient samples.
- Utilization of allele-discriminating probes for rapid assessment of resistance mechanisms.
- Focus on circumventing the delays associated with traditional culture-based diagnostic methods.
Main Results:
- Molecular assays enable direct identification of C. auris DNA from clinical specimens, significantly reducing turnaround time.
- Allele-discriminating probes allow for rapid assessment of key antifungal resistance mechanisms, including those for echinocandins and azoles.
- These advancements provide a faster alternative to conventional culture-dependent methods.
Conclusions:
- Rapid molecular diagnostics are essential for timely identification of Candida auris and its antifungal resistance profiles.
- Direct DNA detection assays improve patient management and infection prevention and control strategies in healthcare facilities.
- Molecular approaches offer a significant advantage over traditional methods in combating C. auris outbreaks.
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