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Guidelines and Experience Using Imaging Biomarker Explorer IBEX for Radiomics
Published on: January 8, 2018
Correlation between CT based radiomics features and gene expression data in non-small cell lung cancer
Ting Wang1, Jing Gong1, Hui-Hong Duan1
1School of Medical Instrument and Food Engineering, University of Shanghai for Science and Technology, Shanghai, China.
This study links computed tomography (CT) radiomics features to gene expression in non-small cell lung cancer (NSCLC). CT imaging can reveal crucial biological insights for NSCLC patients, aiding clinical decisions.
Area of Science:
- Radiogenomics
- Computational Biology
- Medical Imaging Analysis
Background:
- Radiogenomics connects imaging phenotypes with gene expression.
- Non-small cell lung cancer (NSCLC) requires advanced diagnostic tools.
Purpose of the Study:
- To explore associations between CT radiomics features and gene expression in NSCLC.
- To evaluate the potential of radiomics in reflecting biological information for NSCLC.
Main Methods:
- Extracted and selected radiomics features from CT scans of 89 NSCLC patients.
- Clustered co-expressed genes into metagenes and performed statistical analysis.
- Built predictive models and conducted metagene enrichment analysis.
Main Results:
- Identified 187 significant correlations between CT radiomics features and NSCLC metagenes.
- Eighteen metagenes were annotated with Gene Ontology and KEGG terms.
- Achieved prediction accuracies for metagenes ranging from 41.89% to 89.93%.
Conclusions:
- CT radiomics features are associated with NSCLC co-expressed gene sets.
- Radiomics can reflect significant biological information in NSCLC.
- Findings support the clinical utility of CT radiomics for decision support in NSCLC.
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