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Published on: June 29, 2017
blaNDM-5 carried by a hypervirulent Klebsiella pneumoniae with sequence type 29
Yi Yuan1, Ying Li2, Guangxi Wang3
1Department of Laboratory Medicine, The First People's Hospital of Neijiang, Neijiang, Sichuan China.
Background:
A carbapenem-resistant hypermucoviscous Klebsiella pneumoniae isolate was recovered from human sputum.
Methods:
Whole genome sequencing of this isolate was carried out to reveal its clonal background, antimicrobial resistance determinants and virulence factors. Virulence assays were performed using wax moth larvae. The transfer of blaNDM-5 between bacterial strains was tested using conjugation. 59 genome assemblies of ST29 K. pneumoniae and 230 IncX3 plasmids regardless of the carriage of resistance gene were employed for phylogenetic analysis, respectively.
Results:
The strain carried a virulence plasmid pVir-SCNJ1 bearing the virulence gene rmpA and exhibited a high virulence in wax moth. This hypervirulent strain belongs to sequence type 29 and carries blaNDM-5, which is located on a conjugative plasmid, designated pNDM5-SCNJ1, belonging to type IncX3. pNDM5-SCNJ1 was fully sequenced and shows high similarity with pNDM_MGR194, except some deletion inside the ISAba125 region. Phylogenetic analysis of IncX3 plasmids revealed that although blaNDM-5 can be evolved from blaNDM-1 via point mutations within some IncX3 plasmids, most of blaNDM-5-carrying IncX3 plasmids probably have acquired blaNDM-5 in multiple events.
Conclusions:
In this study, we characterized a blaNDM-5-positive hypervirulent K. pneumoniae of sequence type 29 in China. Our results highlight the need for active surveillance on this lineage of carbapenem-resistant K. pneumoniae.
Insights
A carbapenem-resistant, hypervirulent Klebsiella pneumoniae strain (ST29) carrying NDM-5 was identified. This hypervirulent Klebsiella pneumoniae highlights the need for surveillance of this resistant pathogen.
Area of Science:
- Microbiology
- Genomics
- Infectious Diseases
Background:
- A carbapenem-resistant, hypermucoviscous Klebsiella pneumoniae isolate was recovered from human sputum.
- This isolate exhibited hypervirulence and carried the blaNDM-5 gene.
Purpose of the Study:
- To characterize the clonal background, antimicrobial resistance, and virulence factors of a carbapenem-resistant hypermucoviscous Klebsiella pneumoniae isolate.
- To investigate the evolution and transfer of the blaNDM-5 gene within IncX3 plasmids.
Main Methods:
- Whole genome sequencing of the Klebsiella pneumoniae isolate.
- Virulence assays using wax moth larvae.
- Conjugation experiments to assess gene transfer.
- Phylogenetic analysis of ST29 Klebsiella pneumoniae and IncX3 plasmids.
Main Results:
- The isolate, belonging to sequence type 29 (ST29), carried a virulence plasmid (pVir-SCNJ1) with the rmpA gene, conferring high virulence.
- The blaNDM-5 gene was located on a conjugative IncX3 plasmid (pNDM5-SCNJ1).
- Phylogenetic analysis suggested multiple acquisition events of blaNDM-5 in IncX3 plasmids.
Conclusions:
- Characterization of a blaNDM-5-positive hypervirulent Klebsiella pneumoniae ST29 strain in China.
- The findings underscore the importance of active surveillance for this lineage of carbapenem-resistant Klebsiella pneumoniae.
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