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Related Concept Videos

Hydrogen Bonds00:26

Hydrogen Bonds

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Hydrogen bonds are weak attractions between atoms that have formed other chemical bonds. One of these atoms is electronegative, like oxygen, and has a partial negative charge. The other is a hydrogen atom that has bonded with another electronegative atom and has a partial positive charge.
Hydrogen Bonds Control the World!
Because hydrogen has very weak electronegativity when it binds with a strongly electronegative atom, such as oxygen or nitrogen, electrons in the bond are unequally shared....
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A hydrogen bond is formed when a weakly positive hydrogen atom already bonded to one electronegative atom (for example, the oxygen in the water molecule) is attracted to another electronegative atom from another polar molecule, such as water (H2O), hydrogen fluoride (HF), or ammonia (NH3). The huge electronegativity difference between the H atom (2.1) and the atom to which it is bonded (4.0 for an F atom, 3.5 for an O atom, or 3.0 for an N atom), combined with the very small size of an H atom...
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The vibrational frequency of a bond is directly proportional to its bond strength. As a result, stronger bonds vibrate at higher frequencies, while weaker bonds vibrate at lower frequencies. The stretching vibration of the strong O–H bond in alcohols and phenols (very dilute solution or gas phase) appears as a sharp peak at 3600–3650 cm−1.
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Hydrogenation06:06

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Source: Vy M. Dong and Zhiwei Chen, Department of Chemistry, University of California, Irvine, CA
This experiment will demonstrate the hydrogenation of chalcone as an example of an alkene hydrogenation reaction (Figure 1). In this experiment, palladium on carbon (Pd/C) will be used as a heterogeneous catalyst for the process. A balloon will be used to supply the hydrogen atmosphere.
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Hydrogen Bonds in Water
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Tuning antenna function through hydrogen bonds to chlorophyll a.

Manuel J Llansola-Portoles1, Fei Li2, Pengqi Xu3

  • 1Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Saclay, F-91198 Gif-sur-Yvette cedex, France.

Biochimica Et Biophysica Acta. Bioenergetics
|September 3, 2019
PubMed
Summary

Hydrogen bonds to chlorophyll a (Chl-a) in plant light-harvesting proteins tune its absorption energy. Stronger bonds cause red-shifts, influencing energy transfer in photosynthesis.

Keywords:
Chl-aEnergy regulationHydrogen bondsLight-harvestingOxygenic photosynthesis

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Area of Science:

  • Biophysics
  • Photosynthesis research
  • Molecular spectroscopy

Background:

  • Photosynthetic antenna proteins, like LHCII, capture light energy using chlorophyll a (Chl-a).
  • The precise tuning of Chl-a's properties is crucial for efficient energy transfer within these complexes.
  • Understanding Chl-a's microenvironment is key to elucidating photosynthetic mechanisms.

Purpose of the Study:

  • To investigate the molecular mechanism by which hydrogen bonding influences chlorophyll a's spectral properties.
  • To quantify the effect of hydrogen bond strength on Chl-a absorption transitions in light-harvesting complexes.

Main Methods:

  • Low-temperature absorption spectroscopy.
  • Resonance Raman spectroscopy.
  • Analysis of LHCII and CP29 complexes purified using specific detergents.

Main Results:

  • Hydrogen bonding to the keto carbonyl group of Chl-a shifts its Soret and Qy absorption bands to the red.
  • The magnitude of the red-shift is directly proportional to the strength of the involved hydrogen bond.
  • Chl-a with non-hydrogen-bonded keto groups show blue-shifted absorption, while increased bonding causes shifts up to 382 cm⁻¹ (Qy) and 605 cm⁻¹ (Soret).

Conclusions:

  • Hydrogen bonds act as a molecular tuning mechanism for chlorophyll a's site energy within light-harvesting proteins.
  • This tuning significantly influences the cascade of energy transfer events in photosystem II.
  • The study reveals a direct link between protein structure, hydrogen bonding, and the photophysical properties of chlorophyll.